RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 LRRC71Q8N4P6 559 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 NEK9Q8TD19 979 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 TMEM40Q8WWA1 233 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 LINC01599Q8WXQ3 324 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 LXNQ9BS40 222 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 TSPYL2Q9H2G4 693 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-218ENST00000486704 ERVK-5Q9HDB9 667 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 PCDHA12Q9UN75 941 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 FNDC1Q4ZHG4 1894 aaPredicted RBP17.9■□□□□ 0.46
HDAC8-218ENST00000486704 LINC01553A4QN01 128 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 ENPP3O14638 875 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 ADGRE1Q14246 886 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 MTERF2Q49AM1 385 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 FAM117BQ6P1L5 589 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.45
HDAC8-218ENST00000486704 CDHR5Q9HBB8 845 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 RC3H2Q9HBD1 1191 aaKnown RBP17.89■□□□□ 0.45
HDAC8-218ENST00000486704 WRAP73Q9P2S5 460 aaPredicted RBP17.89■□□□□ 0.45
HDAC8-218ENST00000486704 AKT3Q9Y243 479 aa17.89■□□□□ 0.45
HDAC8-218ENST00000486704 TMEM150BA6NC51 233 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 MAFO75444 373 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 RPS6KA5O75582 802 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 POU3F3P20264 500 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 ERVK-21P61565 698 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 GNL2Q13823 731 aaKnown RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 CRIPAKQ8N1N5 446 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 TGS1Q96RS0 853 aaKnown RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 OSMRQ99650 979 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 TMEM60Q9H2L4 133 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 ADAMTS10Q9H324 1103 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 CYP26B1Q9NR63 512 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 GINS2Q9Y248 185 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 NOC2LQ9Y3T9 749 aaKnown RBP17.88■□□□□ 0.45
HDAC8-218ENST00000486704 PRUNE2Q8WUY3 3088 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 ATG2AQ2TAZ0 1938 aa17.88■□□□□ 0.45
HDAC8-218ENST00000486704 EPOPA6NHQ4 379 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 GPR182O15218 404 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 UPP2O95045 317 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 LYPLA2O95372 231 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 MCM7P33993 719 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 GPC3P51654 580 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 NLRP11P59045 1033 aaKnown RBP17.87■□□□□ 0.45
HDAC8-218ENST00000486704 CDC42EP1Q00587 391 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 PLA2G4FQ68DD2 849 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 SPRED2Q7Z698 418 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 RTN4RL1Q86UN2 441 aaPredicted RBP17.87■□□□□ 0.45
HDAC8-218ENST00000486704 FAM228AQ86W67 206 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 EXOC8Q8IYI6 725 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 ARNTL2Q8WYA1 636 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 DYDC2Q96IM9 177 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 HSD17B14Q9BPX1 270 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 SUGCTQ9HAC7 445 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 RGL1Q9NZL6 768 aa17.87■□□□□ 0.45
HDAC8-218ENST00000486704 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
HDAC8-218ENST00000486704 REV3LO60673 3130 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 EIF4BP23588 611 aaKnown RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 YWHABP31946 246 aaKnown RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 RFC5P40937 340 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 TXKP42681 527 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 DNM2P50570 870 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 CYP4A11Q02928 519 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 NPAS4Q8IUM7 802 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 SAMD11Q96NU1 681 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 PPP1R16BQ96T49 567 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 DHX33Q9H6R0 707 aaKnown RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 CERS4Q9HA82 394 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 C1orf112Q9NSG2 853 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 ADGRA3Q8IWK6 1321 aa17.86■□□□□ 0.45
HDAC8-218ENST00000486704 PRRC2BQ5JSZ5 2229 aaKnown RBP17.86■□□□□ 0.45
HDAC8-218ENST00000486704 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
HDAC8-218ENST00000486704 SLITRK3O94933 977 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 GJB2P29033 226 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 NFX1Q12986 1120 aaKnown RBP17.85■□□□□ 0.45
HDAC8-218ENST00000486704 DRP2Q13474 957 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 CTTNQ14247 550 aaKnown RBP17.85■□□□□ 0.45
HDAC8-218ENST00000486704 OTUD6AQ7L8S5 288 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 UNC80Q8N2C7 3258 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 SLC7A3Q8WY07 619 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 ZNF689Q96CS4 500 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-218ENST00000486704 SH2D3AQ9BRG2 576 aa17.85■□□□□ 0.45
HDAC8-218ENST00000486704 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-218ENST00000486704 POTEMA6NI47 508 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 MGEA5O60502 916 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 LPXNO60711 386 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 DGKIO75912 1065 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 STAG3L1P0CL83 205 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 DARSP14868 501 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms