RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 WNT16Q9UBV4 365 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 DAXXQ9UER7 740 aaPredicted RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 DBR1Q9UK59 544 aaKnown RBP9.63□□□□□ -0.87
XRN1-212ENST00000486211 TELO2Q9Y4R8 837 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 ZFYVE26Q68DK2 2539 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 CACNA1IQ9P0X4 2223 aa9.63□□□□□ -0.87
XRN1-212ENST00000486211 LOXHD1Q8IVV2 1947 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 MBLAC1A4D2B0 266 aaPredicted RBP9.62□□□□□ -0.87
XRN1-212ENST00000486211 OPLAHO14841 1288 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 FOXP2O15409 715 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 RNF113AO15541 343 aaKnown RBP9.62□□□□□ -0.87
XRN1-212ENST00000486211 ANP32CO43423 234 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
XRN1-212ENST00000486211 TGFB3P10600 412 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 GLULP15104 373 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 DNAJB3Q8WWF6 145 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 GPR20Q99678 358 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 MLXIPQ9HAP2 919 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 PARD6AQ9NPB6 346 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
XRN1-212ENST00000486211 PADI3Q9ULW8 664 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 SQORQ9Y6N5 450 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 ASPMQ8IZT6 3477 aa9.62□□□□□ -0.87
XRN1-212ENST00000486211 C2orf71A6NGG8 1288 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 TBKBP1A7MCY6 615 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 SPTLC1O15269 473 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 RANBP6O60518 1105 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 FGRP09769 529 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 MYCLP12524 364 aaPredicted RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 SARSP49591 514 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 HSD17B4P51659 736 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 GHRHRQ02643 423 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 DMWDQ09019 674 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 CDC37Q16543 378 aaPredicted RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 ATAT1Q5SQI0 421 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 MARCH8Q5T0T0 291 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 SPOUT1Q5T280 376 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 FAM102BQ5T8I3 360 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 XRRA1Q6P2D8 792 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 ITPRIPQ8IWB1 547 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 MRPL43Q8N983 215 aaKnown RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 ZNF775Q96BV0 537 aaPredicted RBP9.61□□□□□ -0.87
XRN1-212ENST00000486211 SPSB2Q99619 263 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 NAPBQ9H115 298 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 LRFN2Q9ULH4 789 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 SPEGQ15772 3267 aa9.61□□□□□ -0.87
XRN1-212ENST00000486211 SETXQ7Z333 2677 aaKnown RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 SLC30A4O14863 429 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 ORC4O43929 436 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 GDF9O60383 454 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 MGEA5O60502 916 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 GOLGA8HP0CJ92 632 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 LAG3P18627 525 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 PMLP29590 882 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 SHC2P98077 582 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 PGM5Q15124 567 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 ZNF528Q3MIS6 628 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 METTL7BQ6UX53 244 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 OTOP3Q7RTS5 596 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 RSPH3Q86UC2 560 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 SIRT2Q8IXJ6 389 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 BORCS6Q96GS4 357 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 SEC62Q99442 399 aaKnown RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 UBA5Q9GZZ9 404 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 TCP11L1Q9NUJ3 509 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 DZANK1Q9NVP4 752 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 PUF60Q9UHX1 559 aaKnown RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 TUBE1Q9UJT0 475 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 ANGPTL2Q9UKU9 493 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 ZNF215Q9UL58 517 aaPredicted RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 CA14Q9ULX7 337 aa9.6□□□□□ -0.87
XRN1-212ENST00000486211 SMG5Q9UPR3 1016 aaKnown RBP9.6□□□□□ -0.87
XRN1-212ENST00000486211 DOCK5Q9H7D0 1870 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 IGSF9BQ9UPX0 1349 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 FAM187AA6NFU0 413 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 NOP56O00567 594 aaKnown RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 N4BP1O75113 896 aaKnown RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 RAB11FIP3O75154 756 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 ZFYP08048 801 aaPredicted RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 SMC1AQ14683 1233 aaKnown RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 GRIK4Q16099 956 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 UTP14CQ5TAP6 766 aaKnown RBP9.59□□□□□ -0.87
XRN1-212ENST00000486211 LRRC55Q6ZSA7 311 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 TMC7Q7Z402 723 aa9.59□□□□□ -0.87
XRN1-212ENST00000486211 ZBTB44Q8NCP5 570 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms