RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 NRIP1P48552 1158 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 GATMP50440 423 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 PAN2Q504Q3 1202 aaKnown RBP19.93■□□□□ 0.78
MCF2L-226ENST00000486210 JAKMIP3Q5VZ66 844 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 SEPT1Q8WYJ6 367 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 PGBD1Q96JS3 809 aa19.93■□□□□ 0.78
MCF2L-226ENST00000486210 BARX2Q9UMQ3 279 aaPredicted RBP19.93■□□□□ 0.78
MCF2L-226ENST00000486210 M0R2N6 131 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 ITGB5P18084 799 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 GNA11P29992 359 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 PTPN5P54829 565 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 IGBP1P78318 339 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 RBM23Q86U06 439 aaKnown RBP19.92■□□□□ 0.78
MCF2L-226ENST00000486210 NPAS4Q8IUM7 802 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 BLIDQ8IZY5 108 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 DAGLBQ8NCG7 672 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 FBXO18Q8NFZ0 1043 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 PPP2R3CQ969Q6 453 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 PCYT2Q99447 389 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 PCDHA6Q9UN73 950 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 USP15Q9Y4E8 981 aaPredicted RBP19.92■□□□□ 0.78
MCF2L-226ENST00000486210 PCDHA8Q9Y5H6 950 aa19.92■□□□□ 0.78
MCF2L-226ENST00000486210 MTMR1Q13613 665 aa19.91■□□□□ 0.78
MCF2L-226ENST00000486210 TRIM29Q14134 588 aa19.91■□□□□ 0.78
MCF2L-226ENST00000486210 LARP1BQ659C4 914 aaKnown RBP19.91■□□□□ 0.78
MCF2L-226ENST00000486210 FAM177A1Q8N128 213 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-226ENST00000486210 FAM49AQ9H0Q0 323 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-226ENST00000486210 PADI3Q9ULW8 664 aa19.91■□□□□ 0.78
MCF2L-226ENST00000486210 SQORQ9Y6N5 450 aa19.91■□□□□ 0.78
MCF2L-226ENST00000486210 MAFGO15525 162 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 INSRRP14616 1297 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
MCF2L-226ENST00000486210 TMEM62Q0P6H9 643 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 NR5A1Q13285 461 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 GALNT17Q6IS24 598 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 GLG1Q92896 1179 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 TNPO1Q92973 898 aaKnown RBP19.9■□□□□ 0.78
MCF2L-226ENST00000486210 FTHL17Q9BXU8 183 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 GLT8D2Q9H1C3 349 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 TMX1Q9H3N1 280 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 SMARCAD1Q9H4L7 1026 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 PKD2L1Q9P0L9 805 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 KIF3AQ9Y496 699 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 TRPV2Q9Y5S1 764 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 UBIAD1Q9Y5Z9 338 aa19.9■□□□□ 0.78
MCF2L-226ENST00000486210 BTBD18B2RXH4 712 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 KRT2P35908 639 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 EARS2Q5JPH6 523 aaKnown RBP19.89■□□□□ 0.77
MCF2L-226ENST00000486210 TEX2Q8IWB9 1127 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 DIS3L2Q8IYB7 885 aaKnown RBP19.89■□□□□ 0.77
MCF2L-226ENST00000486210 REXO1Q8N1G1 1221 aaKnown RBP19.89■□□□□ 0.77
MCF2L-226ENST00000486210 FBXL6Q8N531 539 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 VN1R2Q8NFZ6 395 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 BICD2Q8TD16 824 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 TNFRSF25Q93038 417 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 ASIC4Q96FT7 647 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 PHF7Q9BWX1 381 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-226ENST00000486210 ANO3Q9BYT9 981 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 IGSF9BQ9UPX0 1349 aa19.89■□□□□ 0.77
MCF2L-226ENST00000486210 RRN3P2A6NIE6 340 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 RPLP2P05387 115 aaKnown RBP19.88■□□□□ 0.77
MCF2L-226ENST00000486210 STAG3L1P0CL83 205 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 SYT1P21579 422 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 VCPP55072 806 aaKnown RBP19.88■□□□□ 0.77
MCF2L-226ENST00000486210 IER5Q5VY09 327 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 SUGP1Q8IWZ8 645 aaKnown RBP19.88■□□□□ 0.77
MCF2L-226ENST00000486210 TRAPPC12Q8WVT3 735 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 SUSD6Q92537 303 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 PRRX2Q99811 253 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 AZI2Q9H6S1 392 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 JADE2Q9NQC1 790 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 ZDBF2Q9HCK1 2354 aa19.88■□□□□ 0.77
MCF2L-226ENST00000486210 FAM205CA6NFA0 338 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 H3BQV1 296 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 PER2O15055 1255 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 SIGLEC14Q08ET2 396 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 AP3B2Q13367 1082 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 ATP8B4Q8TF62 1192 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 SDF4Q9BRK5 362 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 JPH1Q9HDC5 661 aaPredicted RBP19.87■□□□□ 0.77
MCF2L-226ENST00000486210 FAM86C1Q9NVL1 165 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 PLXNA3P51805 1871 aa19.87■□□□□ 0.77
MCF2L-226ENST00000486210 MYO15AQ9UKN7 3530 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 EDIL3O43854 480 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 MGEA5O60502 916 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 FOSP01100 380 aaPredicted RBP19.86■□□□□ 0.77
MCF2L-226ENST00000486210 PAK2Q13177 524 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 PLCB4Q15147 1175 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 TMEM266Q2M3C6 531 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 CELF4Q9BZC1 486 aaKnown RBP19.86■□□□□ 0.77
MCF2L-226ENST00000486210 TLE6Q9H808 572 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 HCSTQ9UBK5 93 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 PCDHA2Q9Y5H9 948 aa19.86■□□□□ 0.77
MCF2L-226ENST00000486210 KDM3AQ9Y4C1 1321 aa19.85■□□□□ 0.77
MCF2L-226ENST00000486210 VPS37CA5D8V6 355 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-226ENST00000486210 ATF7P17544 494 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-226ENST00000486210 ERVFC1P60507 584 aa19.85■□□□□ 0.77
MCF2L-226ENST00000486210 SAFBQ15424 915 aaKnown RBP eCLIP19.85■□□□□ 0.77
MCF2L-226ENST00000486210 PIK3AP1Q6ZUJ8 805 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms