RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CYP26B1Q9NR63 512 aa9.22□□□□□ -0.93
SF3A1-208ENST00000485618 BMP2KQ9NSY1 1161 aaPredicted RBP9.22□□□□□ -0.93
SF3A1-208ENST00000485618 RNF216Q9NWF9 866 aaPredicted RBP9.22□□□□□ -0.93
SF3A1-208ENST00000485618 RGL1Q9NZL6 768 aa9.22□□□□□ -0.93
SF3A1-208ENST00000485618 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
SF3A1-208ENST00000485618 EYSQ5T1H1 3165 aa9.21□□□□□ -0.93
SF3A1-208ENST00000485618 RSPH10B2B2RC85 870 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 WNT7AO00755 349 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 TREHO43280 583 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 ZNF862O60290 1169 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 RSPH10BP0C881 870 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 ACTN1P12814 892 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 DNAJB2P25686 324 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 MARCKSP29966 332 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 HOXC8P31273 242 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 PKP1Q13835 747 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 PTPAQ15257 358 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 RRAGBQ5VZM2 374 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 MFSD5Q6N075 450 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 EFCAB12Q6NXP0 572 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 FAM173BQ6P4H8 233 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 PSPC1Q8WXF1 523 aaKnown RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 SCLT1Q96NL6 688 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 NOC4LQ9BVI4 516 aaKnown RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 TIPINQ9BVW5 301 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-208ENST00000485618 CCSER1Q9C0I3 900 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 SUGCTQ9HAC7 445 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 KCND2Q9NZV8 630 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 RCOR1Q9UKL0 485 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 TBX21Q9UL17 535 aa9.21□□□□□ -0.94
SF3A1-208ENST00000485618 EFCAB14O75071 495 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 MAFO75444 373 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 CKBP12277 381 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 ATP4AP20648 1035 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 COL9A1P20849 921 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 ADAM17P78536 824 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 AMPD3Q01432 767 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 RBL2Q08999 1139 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 TFDP1Q14186 410 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 TARBP2Q15633 366 aaKnown RBP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 UGCGQ16739 394 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 ANO5Q75V66 913 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 LRRC8DQ7L1W4 858 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 MTRQ99707 1265 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 FTOQ9C0B1 505 aaKnown RBP eCLIP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 FAM49AQ9H0Q0 323 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 CSRNP2Q9H175 543 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 CUEDC2Q9H467 287 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 ATP6V0A4Q9HBG4 840 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 TSHZ2Q9NRE2 1034 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 DDX19AQ9NUU7 478 aaKnown RBP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 FBXO2Q9UK22 296 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-208ENST00000485618 AKT3Q9Y243 479 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 TELO2Q9Y4R8 837 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 SQORQ9Y6N5 450 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 CDH23Q9H251 3354 aa9.2□□□□□ -0.94
SF3A1-208ENST00000485618 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 MED24O75448 989 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 C22orf31O95567 290 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 EYA4O95677 639 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 IQCF3P0C7M6 154 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SCP2P22307 547 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 ABCD1P33897 745 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 DDIT3P35638 169 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 RARRES1P49788 294 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 CRYBB1P53674 252 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 MRPS6P82932 125 aaKnown RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 GRIN2CQ14957 1233 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 PPP2R5AQ15172 486 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 IL17AQ16552 155 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 FAM26DQ5JW98 314 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 HYIQ5T013 277 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 MARCH8Q5T0T0 291 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 ADALQ6DHV7 355 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 POTEGQ6S5H5 508 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 PIGOQ8TEQ8 1089 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 DNAJB3Q8WWF6 145 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SEPT8Q92599 483 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 KIFAP3Q92845 792 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 APBB2Q92870 758 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 TIFAQ96CG3 184 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 IFT74Q96LB3 600 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 DRC1Q96MC2 740 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 CELF4Q9BZC1 486 aaKnown RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 GCOM2Q9BZD3 368 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 SUCLA2Q9P2R7 463 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-208ENST00000485618 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms