RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 UNC93B1Q9H1C4 597 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 RPAP3Q9H6T3 665 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 ARMT1Q9H993 441 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 VPS45Q9NRW7 570 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 DCAF16Q9NXF7 216 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 MCM9Q9NXL9 1143 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 ZNF214Q9UL59 606 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 RRP15Q9Y3B9 282 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 WDR19Q8NEZ3 1342 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 TMEM265A0A087WTH1 108 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 ABHD14A-ACY1A0A1B0GW23 586 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM64A6NGJ6 449 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 TRIM64BA6NI03 449 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 B2RBV5 119 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 GOLGA6L22H0YM25 854 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 VWA5AO00534 786 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 MAP3K6O95382 1288 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 IDEP14735 1019 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 AKR1B1P15121 316 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 RAC2P15153 192 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 GALNSP34059 522 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 LRIT3Q3SXY7 679 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 HABP4Q5JVS0 413 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 KIAA1755Q5JYT7 1200 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 MFSD14CQ5VZR4 134 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 WWC2Q6AWC2 1192 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SH3RF1Q7Z6J0 888 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 BRSK2Q8IWQ3 736 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 NSUN6Q8TEA1 469 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 EDC3Q96F86 508 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 OCSTAMPQ9BR26 566 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 MOV10L1Q9BXT6 1211 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 RWDD1Q9H446 243 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 FBRSQ9HAH7 460 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SLC38A10Q9HBR0 1119 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 LUC7L2Q9Y383 392 aaKnown RBP5.97□□□□□ -1.45
CCDC39-205ENST00000485055 PCDHGA11Q9Y5H2 935 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 SLC4A4Q9Y6R1 1079 aa5.97□□□□□ -1.45
CCDC39-205ENST00000485055 EIF1AYO14602 144 aaKnown RBP5.96□□□□□ -1.45
CCDC39-205ENST00000485055 GPAA1O43292 621 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 FARP2O94887 1054 aaPredicted RBP5.96□□□□□ -1.45
CCDC39-205ENST00000485055 SLC3A2P08195 630 aaKnown RBP5.96□□□□□ -1.45
CCDC39-205ENST00000485055 CACNB2Q08289 660 aaPredicted RBP5.96□□□□□ -1.45
CCDC39-205ENST00000485055 PPP2R5EQ16537 467 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 NECAB2Q7Z6G3 386 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 MIGA1Q8NAN2 632 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 KLHDC9Q8NEP7 349 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 ACER1Q8TDN7 264 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 TOX2Q96NM4 488 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 DSCC1Q9BVC3 393 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 NACAP1Q9BZK3 213 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 KATNBL1Q9H079 304 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 BOLA2Q9H3K6 86 aa5.96□□□□□ -1.45
CCDC39-205ENST00000485055 A6NHS1 94 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 M0R2C6 588 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 TTLL1O95922 423 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SETSIPP0DME0 302 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 MYBP10242 640 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 ZKSCAN1P17029 563 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 RAD52P43351 418 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 ICA1Q05084 483 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SSRP1Q08945 709 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 MTFR1Q15390 333 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 C11orf49Q9H6J7 331 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 MKS1Q9NXB0 559 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SAP30BPQ9UHR5 308 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 XPO7Q9UIA9 1087 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 NR2E3Q9Y5X4 410 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SEPT4O43236 478 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 EEF2P13639 858 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SMARCA1P28370 1054 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 HPDP32754 393 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 MRE11P49959 708 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 CCT2P78371 535 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 PDE4BQ07343 736 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 HIBCHQ6NVY1 386 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 PLBD1Q6P4A8 553 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 TMEM92Q6UXU6 159 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 SLF1Q9BQI6 1058 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 NAA15Q9BXJ9 866 aaKnown RBP5.96□□□□□ -1.46
CCDC39-205ENST00000485055 ADAM33Q9BZ11 813 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 PORCNQ9H237 461 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 ANKEF1Q9NU02 776 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 COMMD8Q9NX08 183 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 GIMAP2Q9UG22 337 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 GPR52Q9Y2T5 361 aa5.96□□□□□ -1.46
CCDC39-205ENST00000485055 PFASO15067 1338 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 ESPNB1AK53 854 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 PRKAB2O43741 272 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 TMCC2O75069 709 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 GDF11O95390 407 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 SLC4A1P02730 911 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 PFKPQ01813 784 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 PPARAQ07869 468 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 SLMAPQ14BN4 828 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 TMEM132BQ14DG7 1078 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 MCMDC2Q4G0Z9 681 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 CNNM4Q6P4Q7 775 aa5.95□□□□□ -1.46
CCDC39-205ENST00000485055 CCDC73Q6ZRK6 1079 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms