RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PTX3P26022 381 aaPredicted RBP4.88□□□□□ -1.63
VPS50-216ENST00000484954 RGS3P49796 1198 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 KIF11P52732 1056 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 CREB3L3Q68CJ9 461 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 TRIM68Q6AZZ1 485 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
VPS50-216ENST00000484954 OAZ3Q9UMX2 235 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 CD2APQ9Y5K6 639 aa4.88□□□□□ -1.63
VPS50-216ENST00000484954 A0A0G2JNJ9 132 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 CBX4O00257 560 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 APPP05067 770 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 MRE11P49959 708 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 RAC3P60763 192 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 ALDH6A1Q02252 535 aaKnown RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 DUSP8Q13202 625 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 FHL2Q14192 279 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 ACAP1Q15027 740 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 AGBL4Q5VU57 503 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 CDCA2Q69YH5 1023 aaPredicted RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 CC2D1AQ6P1N0 951 aaPredicted RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 FUKQ8N0W3 1084 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 GIMAP8Q8ND71 665 aaPredicted RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 OR14K1Q8NGZ2 314 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 ZNF341Q9BYN7 854 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 DEF6Q9H4E7 631 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 H2AFY2Q9P0M6 372 aaPredicted RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 Q9UFV3 132 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 FBXO10Q9UK96 956 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 ZFR2Q9UPR6 939 aaKnown RBP4.87□□□□□ -1.63
VPS50-216ENST00000484954 NR2E1Q9Y466 385 aa4.87□□□□□ -1.63
VPS50-216ENST00000484954 B4E1Z4 1266 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 ARHGAP6O43182 974 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 SLC9A1P19634 815 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 CR2P20023 1033 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 ANTXR2P58335 489 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 TGFB2P61812 414 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 SLC6A3Q01959 620 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 ZMAT1Q5H9K5 638 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 SPDYAQ5MJ70 313 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 ESRP1Q6NXG1 681 aaKnown RBP4.86□□□□□ -1.63
VPS50-216ENST00000484954 NPM2Q86SE8 214 aaKnown RBP4.86□□□□□ -1.63
VPS50-216ENST00000484954 JAZF1Q86VZ6 243 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 KIAA1958Q8N8K9 716 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 SCYL1Q96KG9 808 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 B4GALT6Q9UBX8 382 aa4.86□□□□□ -1.63
VPS50-216ENST00000484954 CDC14BO60729 498 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 RFPL3O75679 317 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 PRLP01236 227 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 APEX1P27695 318 aaKnown RBP4.85□□□□□ -1.63
VPS50-216ENST00000484954 STAT3P40763 770 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 SELENOPP49908 381 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 HGFACQ04756 655 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 NFYCQ13952 458 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 ARHGAP44Q17R89 818 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 ZNF568Q3ZCX4 644 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 USP30Q70CQ3 517 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 WDR48Q8TAF3 677 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 C16orf92Q96LL3 132 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 OR14A2Q96R54 314 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 FOXB1Q99853 325 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 PLA2G12BQ9BX93 195 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 AGO3Q9H9G7 860 aaKnown RBP4.85□□□□□ -1.63
VPS50-216ENST00000484954 FANCLQ9NW38 375 aa4.85□□□□□ -1.63
VPS50-216ENST00000484954 MRPL42Q9Y6G3 142 aaKnown RBP4.85□□□□□ -1.63
VPS50-216ENST00000484954 ZNF891A8MT65 544 aaPredicted RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 KPNA6O60684 536 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 ATP2A2P16615 1042 aaKnown RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 FNTBP49356 437 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 ADAM15Q13444 863 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 SAFB2Q14151 953 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS50-216ENST00000484954 MYBPC3Q14896 1274 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 SMN1Q16637 294 aaKnown RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 CFAP100Q494V2 611 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 Q6ZSN1 163 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 GPR135Q8IZ08 494 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 RTKN2Q8IZC4 609 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 NXPE1Q8N323 547 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 CALML6Q8TD86 181 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 ELF4Q99607 663 aaPredicted RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 MTFR1LQ9H019 292 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 C12orf65Q9H3J6 166 aaKnown RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 PCIF1Q9H4Z3 704 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 CABP5Q9NP86 173 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 MAGEC2Q9UBF1 373 aaPredicted RBP4.84□□□□□ -1.63
VPS50-216ENST00000484954 FAM184BQ9ULE4 1060 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 TCAF1Q9Y4C2 921 aa4.84□□□□□ -1.63
VPS50-216ENST00000484954 NPIPB8E9PQR5 432 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 H7C1D1 291 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 MUSKO15146 869 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 MAFO75444 373 aaPredicted RBP4.83□□□□□ -1.64
VPS50-216ENST00000484954 RAD17O75943 681 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 MEOX1P50221 254 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 SLFN12LQ6IEE8 588 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 DHX37Q8IY37 1157 aaKnown RBP4.83□□□□□ -1.64
VPS50-216ENST00000484954 OR5AN1Q8NGI8 311 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 ADOQ96SZ5 270 aa4.83□□□□□ -1.64
VPS50-216ENST00000484954 ACSS2Q9NR19 701 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms