RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 UBA1P22314 1058 aaKnown RBP18.38■□□□□ 0.53
CTSA-207ENST00000484855 MTF1Q14872 753 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 CCL15Q16663 113 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 C2orf69Q8N8R5 385 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 DNAJC7Q99615 494 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 PDHXO00330 501 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 PPP1R37O75864 691 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
CTSA-207ENST00000484855 PRKCEQ02156 737 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 NFIL3Q16649 462 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 TSR1Q2NL82 804 aaKnown RBP18.38■□□□□ 0.53
CTSA-207ENST00000484855 RAD9BQ6WBX8 426 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 HS2ST1Q7LGA3 356 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 SHCBP1Q8NEM2 672 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 CEP170P1Q96L14 293 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 STRA6Q9BX79 667 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 SEPT9Q9UHD8 586 aaPredicted RBP18.38■□□□□ 0.53
CTSA-207ENST00000484855 SLC45A1Q9Y2W3 748 aa18.38■□□□□ 0.53
CTSA-207ENST00000484855 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 A0A1W2PQJ5 194 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 KIF2AO00139 706 aaPredicted RBP18.37■□□□□ 0.53
CTSA-207ENST00000484855 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
CTSA-207ENST00000484855 ALCAMQ13740 583 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 FAM102BQ5T8I3 360 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 FGD4Q96M96 766 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 DESI2Q9BSY9 194 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 MMRN2Q9H8L6 949 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 GPRC5CQ9NQ84 441 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 ARMCX3Q9UH62 379 aaPredicted RBP18.37■□□□□ 0.53
CTSA-207ENST00000484855 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 BTBD19C9JJ37 291 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 AKAP3O75969 853 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 STBD1O95210 358 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 ZBED6P86452 979 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 EEPD1Q7L9B9 569 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 REXO1L1PQ8IX06 675 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 ZNF397Q8NF99 534 aaPredicted RBP18.37■□□□□ 0.53
CTSA-207ENST00000484855 PRIMPOLQ96LW4 560 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 IKZF4Q9H2S9 585 aa18.37■□□□□ 0.53
CTSA-207ENST00000484855 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
CTSA-207ENST00000484855 NEDD9Q14511 834 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 GOLGA5Q8TBA6 731 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 BRI3BPQ8WY22 251 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 ZNF592Q92610 1267 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 PORCNQ9H237 461 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 METTL14Q9HCE5 456 aaKnown RBP18.36■□□□□ 0.53
CTSA-207ENST00000484855 ZNF302Q9NR11 478 aa18.36■□□□□ 0.53
CTSA-207ENST00000484855 GOLGA6L9A6NEM1 432 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 FARP2O94887 1054 aaPredicted RBP18.35■□□□□ 0.53
CTSA-207ENST00000484855 ATG7O95352 703 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 CCDC175P0C221 793 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 TGFB3P10600 412 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 CCNA1P78396 465 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 PPP2R3AQ06190 1150 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 GPRC5AQ8NFJ5 357 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 EFCC1Q9HA90 598 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 AGPAT3Q9NRZ7 376 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 CASP4P49662 377 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 TERF1P54274 439 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 PEX3P56589 373 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 KCNH2Q12809 1159 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 XKR3Q5GH77 459 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 ANKRD23Q86SG2 305 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 SLC17A8Q8NDX2 589 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
CTSA-207ENST00000484855 TMEM206Q9H813 350 aa18.35■□□□□ 0.53
CTSA-207ENST00000484855 DGAT1O75907 488 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 NCKAP1LP55160 1127 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 ACCSQ96QU6 501 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 ST6GALNAC4Q9H4F1 302 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 CYP26B1Q9NR63 512 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 ZNHIT6Q9NWK9 470 aaKnown RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 MAFBQ9Y5Q3 323 aaPredicted RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 SOCS7O14512 581 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 EPHB6O15197 1021 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 GGPS1O95749 300 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 ZBTB48P10074 688 aaPredicted RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 KCNMA1Q12791 1236 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 DMP1Q13316 513 aaPredicted RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 DCAF17Q5H9S7 520 aaPredicted RBP18.34■□□□□ 0.53
CTSA-207ENST00000484855 SPRYD7Q5W111 196 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 HAUS6Q7Z4H7 955 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 MCPH1Q8NEM0 835 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 KIFAP3Q92845 792 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 CHP1Q99653 195 aa18.34■□□□□ 0.53
CTSA-207ENST00000484855 SLC16A4O15374 487 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms