RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 GRM6O15303 877 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 MMP1P03956 469 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 VTNP04004 478 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 CYP3A7P24462 503 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 PRKCEQ02156 737 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 TBC1D8BQ0IIM8 1120 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 PAN2Q504Q3 1202 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 PTCRAQ6ISU1 281 aaPredicted RBP13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 WASF1Q92558 559 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 NAP1L4Q99733 375 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 ATP6V0A4Q9HBG4 840 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 RGS18Q9NS28 235 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-206ENST00000484372 NLRC5Q86WI3 1866 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 HOXA2O43364 376 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 MARCH6O60337 910 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 DNM2P50570 870 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 CLCN3P51790 818 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 ANAPC15P60006 121 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 XKR3Q5GH77 459 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 CRIPAKQ8N1N5 446 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 NEK9Q8TD19 979 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 UNC45AQ9H3U1 944 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 CDHR5Q9HBB8 845 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 DDX25Q9UHL0 483 aaKnown RBP13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 REV3LO60673 3130 aa13.45□□□□□ -0.26
SNRNP200-206ENST00000484372 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 TBKBP1A7MCY6 615 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 H3BQ06 376 aaPredicted RBP13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 GPR32O75388 356 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 PSMD10O75832 226 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 TDP2O95551 362 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 LINC00271P0C7V0 271 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 EIF4BP23588 611 aaKnown RBP13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 SSTR3P32745 418 aaPredicted RBP13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 LETM2Q2VYF4 491 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 FAM228AQ86W67 206 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 ABI1Q8IZP0 508 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 TMEM40Q8WWA1 233 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 ELAC1Q9H777 363 aaKnown RBP13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 TMEM161AQ9NX61 479 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 EVPLQ92817 2033 aa13.44□□□□□ -0.26
SNRNP200-206ENST00000484372 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 C9IYK1 514 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 ZNF862O60290 1169 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 PFKFB2O60825 505 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 CSPG5O95196 566 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 GCFC2P16383 781 aaKnown RBP13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 COL9A1P20849 921 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 UBE3AQ05086 875 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 SCRN1Q12765 414 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 INF2Q27J81 1249 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 EXOC8Q8IYI6 725 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 GJD3Q8N144 294 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 LRRC71Q8N4P6 559 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 MICAL1Q8TDZ2 1067 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 POF1BQ8WVV4 589 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 NLRP7Q8WX94 980 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 FAM20AQ96MK3 541 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 GCOM2Q9BZD3 368 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 IGFLR1Q9H665 355 aa13.43□□□□□ -0.26
SNRNP200-206ENST00000484372 MYO7AQ13402 2215 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 M0R2N6 131 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 EDIL3O43854 480 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 MGEA5O60502 916 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 ITGB1P05556 798 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 IL9P15248 144 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 LAG3P18627 525 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 PSMC5P62195 406 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 FAM189BP81408 668 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 COL19A1Q14993 1142 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 MTERF2Q49AM1 385 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 THNSL1Q8IYQ7 743 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 MBOAT7Q96N66 472 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 AIFM3Q96NN9 605 aa13.42□□□□□ -0.26
SNRNP200-206ENST00000484372 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms