RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NDST4Q9H3R1 872 aa28.89■■■□□ 2.22
SHOX2-204ENST00000483851 ZNF302Q9NR11 478 aa28.89■■■□□ 2.22
SHOX2-204ENST00000483851 DDX41Q9UJV9 622 aaKnown RBP28.89■■■□□ 2.22
SHOX2-204ENST00000483851 IVNS1ABPQ9Y6Y0 642 aa28.89■■■□□ 2.22
SHOX2-204ENST00000483851 ARID2Q68CP9 1835 aa28.89■■■□□ 2.22
SHOX2-204ENST00000483851 DGAT1O75907 488 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 NR2F2P24468 414 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 PRKCEQ02156 737 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 RBL2Q08999 1139 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 ZNF792Q3KQV3 632 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 MCPH1Q8NEM0 835 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 NAA15Q9BXJ9 866 aaKnown RBP28.89■■■□□ 2.21
SHOX2-204ENST00000483851 FAM184BQ9ULE4 1060 aa28.89■■■□□ 2.21
SHOX2-204ENST00000483851 PES1O00541 588 aaKnown RBP28.88■■■□□ 2.21
SHOX2-204ENST00000483851 RRP9O43818 475 aaKnown RBP28.88■■■□□ 2.21
SHOX2-204ENST00000483851 MFAP3LO75121 409 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 GYPCP04921 128 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 PPP2R3AQ06190 1150 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 CCDC40Q4G0X9 1142 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 KIFAP3Q92845 792 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 CEP170P1Q96L14 293 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 KCNG1Q9UIX4 513 aa28.88■■■□□ 2.21
SHOX2-204ENST00000483851 SLC16A3O15427 465 aaKnown RBP28.87■■■□□ 2.21
SHOX2-204ENST00000483851 RTP1P59025 263 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 FIGNQ5HY92 759 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 FRMD5Q7Z6J6 570 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 RASAL3Q86YV0 1011 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 AFAP1L1Q8TED9 768 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 SEPT1Q8WYJ6 367 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 TMEM206Q9H813 350 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 POLD4Q9HCU8 107 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 CGNQ9P2M7 1197 aaKnown RBP28.87■■■□□ 2.21
SHOX2-204ENST00000483851 PAXBP1Q9Y5B6 917 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 PLXNA1Q9UIW2 1896 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 ARHGAP6O43182 974 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 MAPK4P31152 587 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 NPEPPSP55786 919 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 SP4Q02446 784 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 MYBPC2Q14324 1141 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 FAM160B1Q5W0V3 765 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 PLA2G4FQ68DD2 849 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 HS2ST1Q7LGA3 356 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 TRIM59Q8IWR1 403 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 TMEM174Q8WUU8 243 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 BAG1Q99933 345 aaPredicted RBP28.87■■■□□ 2.21
SHOX2-204ENST00000483851 CYP26B1Q9NR63 512 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 DIS3Q9Y2L1 958 aaKnown RBP28.87■■■□□ 2.21
SHOX2-204ENST00000483851 PPME1Q9Y570 386 aa28.87■■■□□ 2.21
SHOX2-204ENST00000483851 GSTTP1A0A1W2PQM5 241 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 CTIFO43310 598 aaKnown RBP28.86■■■□□ 2.21
SHOX2-204ENST00000483851 GGPS1O95749 300 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 ADORA2AP29274 412 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 ADKP55263 362 aaKnown RBP28.86■■■□□ 2.21
SHOX2-204ENST00000483851 SNRPFP62306 86 aaKnown RBP28.86■■■□□ 2.21
SHOX2-204ENST00000483851 TMEM139Q8IV31 216 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 ZNF526Q8TF50 670 aaPredicted RBP28.86■■■□□ 2.21
SHOX2-204ENST00000483851 MLXIPQ9HAP2 919 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 METTL14Q9HCE5 456 aaKnown RBP28.86■■■□□ 2.21
SHOX2-204ENST00000483851 PDLIM7Q9NR12 457 aa28.86■■■□□ 2.21
SHOX2-204ENST00000483851 ZMYM2Q9UBW7 1377 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 TGFB1I1O43294 461 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 NR3C1P04150 777 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 CASP14P31944 242 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 ZNF157P51786 506 aaPredicted RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 CCDC62Q6P9F0 684 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 HVCN1Q96D96 273 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 GBP3Q9H0R5 595 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 OATP04181 439 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 FECHP22830 423 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 INHBEP58166 350 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 ZC2HC1CQ53FD0 456 aaPredicted RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 CELF3Q5SZQ8 465 aaKnown RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 CEP135Q66GS9 1140 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 SPIRE2Q8WWL2 714 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 NTPCRQ9BSD7 190 aaKnown RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 MKNK1Q9BUB5 465 aa28.85■■■□□ 2.21
SHOX2-204ENST00000483851 NIFKQ9BYG3 293 aaKnown RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 SEPT9Q9UHD8 586 aaPredicted RBP28.85■■■□□ 2.21
SHOX2-204ENST00000483851 TMEM150BA6NC51 233 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 K7ENM7 598 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 ABCD1P33897 745 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 SMTNP53814 917 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 NCKAP1LP55160 1127 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 GTF2BQ00403 316 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 TTLL4Q14679 1199 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 PTPN14Q15678 1187 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 RGMBQ6NW40 437 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 SAPCD2Q86UD0 394 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 SCFD2Q8WU76 684 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 VTA1Q9NP79 307 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 TELO2Q9Y4R8 837 aa28.84■■■□□ 2.21
SHOX2-204ENST00000483851 CCP110O43303 1012 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 SCP2P22307 547 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 GRB14Q14449 540 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 ARMCX2Q7L311 632 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 EEPD1Q7L9B9 569 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 SLC9A9Q8IVB4 645 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 ATP6V0A4Q9HBG4 840 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 NRBP2Q9NSY0 501 aa28.83■■■□□ 2.21
SHOX2-204ENST00000483851 CAPN11Q9UMQ6 739 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms