RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 ARID2Q68CP9 1835 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 PPP1R37O75864 691 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 SOX10P56693 466 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 FOXR2Q6PJQ5 311 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 ZNF720Q7Z2F6 126 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 NELFCDQ8IXH7 590 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 AFG1LQ8WV93 481 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 BSNDQ8WZ55 320 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 MRFAP1L1Q96HT8 127 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 TIPINQ9BVW5 301 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 SRRTQ9BXP5 876 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 XPO4Q9C0E2 1151 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 MRPL44Q9H9J2 332 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 INTS13Q9NVM9 706 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
HDAC6-226ENST00000483656 GNEQ9Y223 722 aaKnown RBP11.17□□□□□ -0.62
HDAC6-226ENST00000483656 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 NKRFO15226 690 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 TRPA1O75762 1119 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 DGAT1O75907 488 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 HOXD8P13378 290 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 PLS3P13797 630 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 CDC25BP30305 580 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 FLT3LGP49771 235 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 SP3Q02447 781 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 TNFAIP2Q03169 654 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 KCNA1Q09470 495 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 FAM102BQ5T8I3 360 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 LRRC55Q6ZSA7 311 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 KSR1Q8IVT5 923 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ZC3H3Q8IXZ2 948 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 PPTC7Q8NI37 304 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ATP8B4Q8TF62 1192 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 DHX33Q9H6R0 707 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 NRBP2Q9NSY0 501 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 LIMA1Q9UHB6 759 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 MYH9P35579 1960 aaKnown RBP11.16□□□□□ -0.62
HDAC6-226ENST00000483656 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
HDAC6-226ENST00000483656 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 EIF3DO15371 548 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 GCNT3O95395 438 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 LGALS2P05162 132 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 MMP3P08254 477 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 MARK3P27448 753 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 UBASH3AP57075 661 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 PRKCZQ05513 592 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 EMC2Q15006 297 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 KRT31Q15323 416 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 TPD52L1Q16890 204 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 KNOP1Q1ED39 458 aaKnown RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 TCP11X2Q5H9J9 407 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 FAM178BQ8IXR5 827 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 CSGALNACT2Q8N6G5 542 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 OR6J1Q8NGC5 347 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 NOC3LQ8WTT2 800 aaKnown RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 BBXQ8WY36 941 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 TRIB2Q92519 343 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 GLG1Q92896 1179 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-226ENST00000483656 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 DRC1Q96MC2 740 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 C16orf70Q9BSU1 422 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 RNPEPQ9H4A4 650 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.62
HDAC6-226ENST00000483656 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 KCNJ18B7U540 433 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 PDXKO00764 312 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 DYNC1LI2O43237 492 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 PPFIA4O75335 1185 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 MAFO75444 373 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 SERPINC1P01008 464 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 ARL2P36404 184 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 RFC5P40937 340 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 SLC26A2P50443 739 aa11.14□□□□□ -0.63
HDAC6-226ENST00000483656 COPB1P53618 953 aaKnown RBP11.14□□□□□ -0.63
HDAC6-226ENST00000483656 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms