RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
DDR1-244ENST00000482873 ETNPPLQ8TBG4 499 aa16.63■□□□□ 0.25
DDR1-244ENST00000482873 LENG9Q96B70 501 aa16.63■□□□□ 0.25
DDR1-244ENST00000482873 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
DDR1-244ENST00000482873 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 PLS1Q14651 629 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 SYDE2Q5VT97 1194 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 GGA2Q9UJY4 613 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 GCNT3O95395 438 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 BMP3P12645 472 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 HOXD13P35453 343 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 HSD17B3P37058 310 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDR1-244ENST00000482873 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
DDR1-244ENST00000482873 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 SH2D3AQ9BRG2 576 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 OSBPL7Q9BZF2 842 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 NYAP2Q9P242 653 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
DDR1-244ENST00000482873 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 ZBTB12Q9Y330 459 aaPredicted RBP16.62■□□□□ 0.25
DDR1-244ENST00000482873 PCDHGC5Q9Y5F6 944 aa16.62■□□□□ 0.25
DDR1-244ENST00000482873 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 H0YGN5 161 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 DDX39AO00148 427 aaKnown RBP16.61■□□□□ 0.25
DDR1-244ENST00000482873 RAD17O75943 681 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 TMOD1P28289 359 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 USP11P51784 963 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 UAP1Q16222 522 aaPredicted RBP16.61■□□□□ 0.25
DDR1-244ENST00000482873 QPCTQ16769 361 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
DDR1-244ENST00000482873 PLCB1Q9NQ66 1216 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 NFS1Q9Y697 457 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 ABCB11O95342 1321 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 DNM1LO00429 736 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 BACH1O14867 736 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 C21orf2O43822 256 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 TBC1D10BQ4KMP7 808 aaPredicted RBP16.61■□□□□ 0.25
DDR1-244ENST00000482873 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
DDR1-244ENST00000482873 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDR1-244ENST00000482873 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 HDAC9Q9UKV0 1011 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
DDR1-244ENST00000482873 GOLGA6L10A6NI86 522 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 H0YIN7 160 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 CETN3O15182 167 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 MYZAPP0CAP1 466 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 NMT1P30419 496 aaKnown RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 RDXP35241 583 aaKnown RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 KLHL30Q0D2K2 578 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 CCDC121Q6ZUS5 278 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 GMNCA6NCL1 334 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 SRRM3A6NNA2 597 aaPredicted RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 AKAP3O75969 853 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 SERPING1P05155 500 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 COG2Q14746 738 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 MKL1Q969V6 931 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 NEUROG2Q9H2A3 272 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.258e-8■■■■□ 25.6
DDR1-244ENST00000482873 FBXO28Q9NVF7 368 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
DDR1-244ENST00000482873 PCNTO95613 3336 aa16.6■□□□□ 0.25
DDR1-244ENST00000482873 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 ZNF844Q08AG5 666 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 ARFGAP2Q8N6H7 521 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 RDH13Q8NBN7 331 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDR1-244ENST00000482873 CEP72Q9P209 647 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 TRAPPC3O43617 180 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 CTNNA1P35221 906 aaKnown RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 TNNC1P63316 161 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 SLC18A3Q16572 532 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 HYIQ5T013 277 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 RPAINQ86UA6 219 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 SLFN12Q8IYM2 578 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms