RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 TUBE1Q9UJT0 475 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
CCM2-215ENST00000482714 ASAP2O43150 1006 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 ZNF202O95125 648 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 MYL1P05976 194 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 PTMSP20962 102 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 NDUFA8P51970 172 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 IER5Q5VY09 327 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 KCNK18Q7Z418 384 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 RSPH3Q86UC2 560 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 SERINC5Q86VE9 423 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 PLIN2Q99541 437 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 LMBRD1Q9NUN5 540 aa17.06■□□□□ 0.32
CCM2-215ENST00000482714 A0A087X0B3 334 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 TREHO43280 583 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 C22orf31O95567 290 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 POLGP54098 1239 aaPredicted RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 IGBP1P78318 339 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 TLE2Q04725 743 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 PLA2G4FQ68DD2 849 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 EFCAB12Q6NXP0 572 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 FAM43BQ6ZT52 329 aaPredicted RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 FMR1NBQ8N0W7 255 aaPredicted RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 DHX58Q96C10 678 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 C17orf75Q9HAS0 396 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 MKI67P46013 3256 aaKnown RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 A0A087WWV3 80 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 B4GALT4O60513 344 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
CCM2-215ENST00000482714 CYP2C9P11712 490 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 MCM4P33991 863 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 RTP1P59025 263 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 RBL2Q08999 1139 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 HIC1Q14526 733 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 CNNM4Q6P4Q7 775 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 MTRQ99707 1265 aa17.05■□□□□ 0.32
CCM2-215ENST00000482714 POU5F1BQ06416 359 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 BFSP2Q13515 415 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
CCM2-215ENST00000482714 MCM6Q14566 821 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 MXD4Q14582 209 aaPredicted RBP17.04■□□□□ 0.32
CCM2-215ENST00000482714 LRRC26Q2I0M4 334 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 CCDC155Q8N6L0 562 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 KIFAP3Q92845 792 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 TRMT13Q9NUP7 481 aaKnown RBP17.04■□□□□ 0.32
CCM2-215ENST00000482714 HOOK1Q9UJC3 728 aaKnown RBP17.04■□□□□ 0.32
CCM2-215ENST00000482714 ODF2LQ9ULJ1 636 aa17.04■□□□□ 0.32
CCM2-215ENST00000482714 LOXHD1Q8IVV2 1947 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 PARNO95453 639 aaKnown RBP17.03■□□□□ 0.32
CCM2-215ENST00000482714 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCM2-215ENST00000482714 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
CCM2-215ENST00000482714 FAAP100Q0VG06 881 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 EMC2Q15006 297 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 TRIM60Q495X7 471 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 KIAA0319LQ8IZA0 1049 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 CNNM3Q8NE01 707 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 C7orf25Q9BPX7 421 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
CCM2-215ENST00000482714 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
CCM2-215ENST00000482714 PQBP1O60828 265 aaKnown RBP17.02■□□□□ 0.32
CCM2-215ENST00000482714 CLTBP09497 229 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 SCP2P22307 547 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 ARL2P36404 184 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 ARSHQ5FYA8 562 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 LRRC15Q8TF66 581 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 PSPC1Q8WXF1 523 aaKnown RBP17.02■□□□□ 0.32
CCM2-215ENST00000482714 DRC1Q96MC2 740 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 SH2D3AQ9BRG2 576 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
CCM2-215ENST00000482714 ATP11BQ9Y2G3 1177 aa17.02■□□□□ 0.32
CCM2-215ENST00000482714 USO1O60763 962 aaKnown RBP17.01■□□□□ 0.31
CCM2-215ENST00000482714 KINO60870 393 aaKnown RBP17.01■□□□□ 0.31
CCM2-215ENST00000482714 MBD3O95983 291 aa17.01■□□□□ 0.31
CCM2-215ENST00000482714 PPP2R5AQ15172 486 aa17.01■□□□□ 0.31
CCM2-215ENST00000482714 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
CCM2-215ENST00000482714 NTPCRQ9BSD7 190 aaKnown RBP17.01■□□□□ 0.31
CCM2-215ENST00000482714 XPNPEP1Q9NQW7 623 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms