RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 BCAS4Q8TDM0 211 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
C9orf3-218ENST00000482056 LRRC45Q96CN5 670 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 ARHGEF10LQ9HCE6 1279 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 KCND2Q9NZV8 630 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 PCDHAC2Q9Y5I4 1007 aa16.74■□□□□ 0.27
C9orf3-218ENST00000482056 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-218ENST00000482056 IGLV3-22A0A075B6J6 115 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 ZSCAN5CA6NGD5 496 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-218ENST00000482056 OPLAHO14841 1288 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 TRIM37O94972 964 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 PPP2R5CQ13362 524 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 CTTNQ14247 550 aaKnown RBP16.73■□□□□ 0.27
C9orf3-218ENST00000482056 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 KDM7AQ6ZMT4 941 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 SLFN11Q7Z7L1 901 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 PPM1EQ8WY54 764 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 NACC1Q96RE7 527 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 STK33Q9BYT3 514 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 PLEKHA4Q9H4M7 779 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 HMGB1P1B2RPK0 211 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-218ENST00000482056 GCOM1H8Y6P7 765 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-218ENST00000482056 POLR2MP0CAP2 368 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 SOX5P35711 763 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 PRELPP51888 382 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 C1orf186Q6ZWK4 172 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 DAAM2Q86T65 1068 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 CYP2W1Q8TAV3 490 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 SLC5A5Q92911 643 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 SLITRK6Q9H5Y7 841 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 GOPCQ9HD26 462 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 AMFRQ9UKV5 643 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
C9orf3-218ENST00000482056 NOC2LQ9Y3T9 749 aaKnown RBP16.73■□□□□ 0.27
C9orf3-218ENST00000482056 FRMPD4Q14CM0 1322 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 KRIT1O00522 736 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 DDX3XO00571 662 aaKnown RBP eCLIP16.72■□□□□ 0.27
C9orf3-218ENST00000482056 GAS7O60861 476 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 PSMD10O75832 226 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 KRT14P02533 472 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
C9orf3-218ENST00000482056 CCT5P48643 541 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 PPP2R5AQ15172 486 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
C9orf3-218ENST00000482056 DIS3Q9Y2L1 958 aaKnown RBP16.72■□□□□ 0.27
C9orf3-218ENST00000482056 ZMYM2Q9UBW7 1377 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 SLX4Q8IY92 1834 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 LOXHD1Q8IVV2 1947 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
C9orf3-218ENST00000482056 ZNF233A6NK53 670 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CHMP2AO43633 222 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 SLITRK3O94933 977 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CFBP00751 764 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 FMO5P49326 533 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 MTMR3Q13615 1198 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 ATP6V1G3Q96LB4 118 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 TMEM51Q9NW97 253 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 TMOD2Q9NZR1 351 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 NCANO14594 1321 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 F8VZ95 297 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 EVI5O60447 810 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 RFX1P22670 979 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 SETQ01105 290 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 KCNA1Q09470 495 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CLUL1Q15846 466 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 EMC10Q5UCC4 262 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 AJAP1Q9UKB5 411 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 PLAAQ9Y263 795 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 STXBP5LQ9Y2K9 1186 aa16.71■□□□□ 0.27
C9orf3-218ENST00000482056 MRPL11Q9Y3B7 192 aaKnown RBP16.71■□□□□ 0.27
C9orf3-218ENST00000482056 MMP10P09238 476 aa16.7■□□□□ 0.26
C9orf3-218ENST00000482056 TMEM253P0C7T8 217 aa16.7■□□□□ 0.26
C9orf3-218ENST00000482056 NR1D1P20393 614 aa16.7■□□□□ 0.26
C9orf3-218ENST00000482056 ZNF131P52739 623 aa16.7■□□□□ 0.26
C9orf3-218ENST00000482056 GALCP54803 685 aa16.7■□□□□ 0.26
C9orf3-218ENST00000482056 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms