RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 KCNN1Q92952 543 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 FGD4Q96M96 766 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 PARK7Q99497 189 aaKnown RBP12.88□□□□□ -0.35
GGPS1-205ENST00000482013 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
GGPS1-205ENST00000482013 PDLIM7Q9NR12 457 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
GGPS1-205ENST00000482013 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
GGPS1-205ENST00000482013 PLXNA1Q9UIW2 1896 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 PLXNB2O15031 1838 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
GGPS1-205ENST00000482013 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 BACH1O14867 736 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ZNF862O60290 1169 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 NR3C1P04150 777 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 NR2F2P24468 414 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 SMTNP53814 917 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 TERF1P54274 439 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 GTF2BQ00403 316 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 FSTL1Q12841 308 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 TSR1Q2NL82 804 aaKnown RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 METTL7BQ6UX53 244 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ANO5Q75V66 913 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 EXOC8Q8IYI6 725 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ACCSQ96QU6 501 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 NIFKQ9BYG3 293 aaKnown RBP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 ZNF302Q9NR11 478 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 DMAC2Q9NW81 257 aa12.87□□□□□ -0.35
GGPS1-205ENST00000482013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGPS1-205ENST00000482013 GOLGA6L9A6NEM1 432 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 TGFB1I1O43294 461 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CYP2C8P10632 490 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 KRT9P35527 623 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 ZBED6P86452 979 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 PRKCEQ02156 737 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 SYCP1Q15431 976 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 ZNF792Q3KQV3 632 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CST9Q5W186 159 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 FAM167AQ96KS9 214 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 TTYH3Q9C0H2 523 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
GGPS1-205ENST00000482013 EXOC7Q9UPT5 735 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 SIK3Q9Y2K2 1263 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
GGPS1-205ENST00000482013 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 MANSC4A6NHS7 340 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 K7ENM7 598 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 MAPK13O15264 365 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 OATP04181 439 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 PGK2P07205 417 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 MAPK4P31152 587 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 PSMC2P35998 433 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 RFC5P40937 340 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 NPEPPSP55786 919 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 INHBEP58166 350 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 CDK17Q00537 523 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 DNTTIP2Q5QJE6 756 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 HAUS6Q7Z4H7 955 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 C17orf53Q8N3J3 647 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 ANKRD13CQ8N6S4 541 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
GGPS1-205ENST00000482013 PORCNQ9H237 461 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 EFCC1Q9HA90 598 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 NMRK2Q9NPI5 230 aa12.85□□□□□ -0.35
GGPS1-205ENST00000482013 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
GGPS1-205ENST00000482013 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms