RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NRBP2Q9NSY0 501 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 GJB4Q9NTQ9 266 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 PPP4R2Q9NY27 417 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 PLAGL2Q9UPG8 496 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 CEP131Q9UPN4 1083 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 AKT3Q9Y243 479 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 CYP3A7-CYP3A51PA0A087WV96 503 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 GPR182O15218 404 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 MAGEB2O15479 319 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 CYP3A7P24462 503 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 DNAJB1P25685 340 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 NLRP11P59045 1033 aaKnown RBP20.94■□□□□ 0.94
CLK1-211ENST00000481641 CAMK1Q14012 370 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 INF2Q27J81 1249 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 FAM102BQ5T8I3 360 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 PTCRAQ6ISU1 281 aaPredicted RBP20.94■□□□□ 0.94
CLK1-211ENST00000481641 MIER3Q7Z3K6 550 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 NEK9Q8TD19 979 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 KHSRPQ92945 711 aaKnown RBP eCLIP20.94■□□□□ 0.948e-10■■■□□ 19
CLK1-211ENST00000481641 C22orf23Q9BZE7 217 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 SLKQ9H2G2 1235 aaPredicted RBP20.94■□□□□ 0.94
CLK1-211ENST00000481641 EPHX3Q9H6B9 360 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 RGS18Q9NS28 235 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 CLDND1Q9NY35 253 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 PCDHB7Q9Y5E2 793 aa20.94■□□□□ 0.94
CLK1-211ENST00000481641 TMEM150BA6NC51 233 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 C9IYK1 514 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 ITGB1P05556 798 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 SFNP31947 248 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 GTF2F1P35269 517 aaKnown RBP eCLIP20.93■□□□□ 0.94
CLK1-211ENST00000481641 JAK3P52333 1124 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 HYAL1Q12794 435 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 NONOQ15233 471 aaKnown RBP eCLIP20.93■□□□□ 0.94
CLK1-211ENST00000481641 KLHL23Q8NBE8 558 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 PABPC5Q96DU9 382 aaKnown RBP20.93■□□□□ 0.94
CLK1-211ENST00000481641 SH2D3AQ9BRG2 576 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 PLVAPQ9BX97 442 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 LMAN2LQ9H0V9 348 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 ADAMTS10Q9H324 1103 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 HCSTQ9UBK5 93 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 RAPGEFL1Q9UHV5 662 aa20.93■□□□□ 0.94
CLK1-211ENST00000481641 FNDC1Q4ZHG4 1894 aaPredicted RBP20.92■□□□□ 0.94
CLK1-211ENST00000481641 TBKBP1A7MCY6 615 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 SLC37A4O43826 429 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 MMP1P03956 469 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 DSC3Q14574 896 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 SLC24A5Q71RS6 500 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 ETNPPLQ8TBG4 499 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 SPPL3Q8TCT6 385 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 MBOAT7Q96N66 472 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 MAP7D2Q96T17 732 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 PHF20Q9BVI0 1012 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 IGFLR1Q9H665 355 aa20.92■□□□□ 0.94
CLK1-211ENST00000481641 GRXCR2A6NFK2 248 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 PFKFB2O60825 505 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 STBD1O95210 358 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 CTDNEP1O95476 244 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 FGFR1P11362 822 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 COL9A1P20849 921 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 TMOD1P28289 359 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 LTBRP36941 435 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 AK2P54819 239 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 DRP2Q13474 957 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 COL19A1Q14993 1142 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 LETM2Q2VYF4 491 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 MTERF2Q49AM1 385 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 ODR4Q5SWX8 454 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 GALNT17Q6IS24 598 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 B3GNT9Q6UX72 402 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 KRT25Q7Z3Z0 450 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 OXER1Q8TDS5 423 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 P2RX5Q93086 422 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 C1orf112Q9NSG2 853 aa20.91■□□□□ 0.94
CLK1-211ENST00000481641 SEPT9Q9UHD8 586 aaPredicted RBP20.91■□□□□ 0.94
CLK1-211ENST00000481641 DDX25Q9UHL0 483 aaKnown RBP20.91■□□□□ 0.94
CLK1-211ENST00000481641 CDKL5O76039 1030 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 FGFR4P22455 802 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 IRS1P35568 1242 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 GPC3P51654 580 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 DLX2Q07687 328 aaPredicted RBP20.9■□□□□ 0.94
CLK1-211ENST00000481641 TBC1D8BQ0IIM8 1120 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 TARBP2Q15633 366 aaKnown RBP20.9■□□□□ 0.94
CLK1-211ENST00000481641 CLUL1Q15846 466 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 SPOUT1Q5T280 376 aaKnown RBP20.9■□□□□ 0.94
CLK1-211ENST00000481641 FAM178BQ8IXR5 827 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 PCDHGC5Q9Y5F6 944 aa20.9■□□□□ 0.94
CLK1-211ENST00000481641 CCDC194A0A1B0GVG4 234 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 EML1O00423 815 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 LINC01565O15544 149 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 CSDE1O75534 798 aaKnown RBP20.89■□□□□ 0.93
CLK1-211ENST00000481641 FAM189BP81408 668 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 MOXD1Q6UVY6 613 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 ADGRD2Q7Z7M1 963 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 NECAB1Q8N987 351 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 RDM1Q8NG50 284 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 POF1BQ8WVV4 589 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 CEP89Q96ST8 783 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 ATP6V0A4Q9HBG4 840 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 PLXNA4Q9HCM2 1894 aa20.89■□□□□ 0.93
CLK1-211ENST00000481641 STK36Q9NRP7 1315 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms