RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 OR6J1Q8NGC5 347 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 VPS11Q9H270 941 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 H2AFY2Q9P0M6 372 aaPredicted RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 IKBKBO14920 756 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 RASSF7Q02833 373 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 PPARAQ07869 468 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 MAGOHBQ96A72 148 aaKnown RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 YME1L1Q96TA2 773 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 EIF2AQ9BY44 585 aaKnown RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 LMNAP02545 664 aaKnown RBP12.37□□□□□ -0.43
TRIM27-205ENST00000481474 PSMA2P25787 234 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 PEX3P56589 373 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 TMEM154Q6P9G4 183 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 SPZ1Q9BXG8 430 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 TRIM8Q9BZR9 551 aa12.37□□□□□ -0.43
TRIM27-205ENST00000481474 USP14P54578 494 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 GRIN1Q05586 938 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 RBBP4Q09028 425 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 ATP9BO43861 1147 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 HSPA4LO95757 839 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 SERPINB2P05120 415 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 SLFN12Q8IYM2 578 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 PHACTR4Q8IZ21 702 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 SNX6Q9UNH7 406 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 V9GYQ6 96 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 K7ERI5 159 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 MED7O43513 233 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 PEX5P50542 639 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 PDE1AP54750 535 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 PHLDB3Q6NSJ2 640 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 SPATA2LQ8IUW3 424 aaPredicted RBP12.36□□□□□ -0.43
TRIM27-205ENST00000481474 RNPEPQ9H4A4 650 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 TSC22D2O75157 780 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 KRT33AO76009 404 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 LRG1P02750 347 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 FGFR1P11362 822 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 MFAP3P55082 362 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
TRIM27-205ENST00000481474 CD109Q6YHK3 1445 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 DHX9Q08211 1270 aaKnown RBP12.36□□□□□ -0.43
TRIM27-205ENST00000481474 ZNF235Q14590 738 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 POSTNQ15063 836 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 MIER2Q8N344 545 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 C19orf44Q9H6X5 657 aa12.36□□□□□ -0.43
TRIM27-205ENST00000481474 GFPT2O94808 682 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 PCDH8O95206 1070 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ZNF568Q3ZCX4 644 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 DESI2Q9BSY9 194 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ALDH1L2Q3SY69 923 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 DGKHQ86XP1 1220 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 PNMA1Q8ND90 353 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 AGAP3Q96P47 875 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 LINC00854A0A1B0GVQ3 168 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ATP12AP54707 1039 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 MRPS15P82914 257 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 LPIN2Q92539 896 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 TRIM54Q9BYV2 358 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 STN1Q9H668 368 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 PAPOLAP51003 745 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 RARBP10826 455 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 VAC14Q08AM6 782 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ADA2Q9NZK5 511 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 SPASTQ9UBP0 616 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 ZC3H7BQ9UGR2 993 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 GGT7Q9UJ14 662 aa12.35□□□□□ -0.43
TRIM27-205ENST00000481474 IPO5O00410 1097 aaKnown RBP12.35□□□□□ -0.43
TRIM27-205ENST00000481474 NFICP08651 508 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms