RNA–Protein interactions for RNA: ENST00000481147.1

RBM17-211, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-211	ENST00000481147	NOP56	O00567	594 aa	Known RBP	13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	ZNF862	O60290	1169 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	STBD1	O95210	358 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	OAT	P04181	439 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	MYB	P10242	640 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	TXN	P10599	105 aa	Known RBP	13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	CLCN1	P35523	988 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	RFC5	P40937	340 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	SLC26A2	P50443	739 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	RTP1	P59025	263 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	PRKCE	Q02156	737 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	MAPK7	Q13164	816 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	GRB14	Q14449	540 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	VWA3B	Q502W6	1294 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	UTP14C	Q5TAP6	766 aa	Known RBP	13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	LRRC55	Q6ZSA7	311 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	ARMCX2	Q7L311	632 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	EEPD1	Q7L9B9	569 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	FRMD5	Q7Z6J6	570 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	CNGA4	Q8IV77	575 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	KIAA1524	Q8TCG1	905 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	HVCN1	Q96D96	273 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	ACCS	Q96QU6	501 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	FGFBP2	Q9BYJ0	223 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	R3HDML	Q9H3Y0	253 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	ZFYVE28	Q9HCC9	887 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	CYP26B1	Q9NR63	512 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	EXOC7	Q9UPT5	735 aa		13.55	□□□□□ -0.24
RBM17-211	ENST00000481147	RBM47	A0AV96	593 aa	Known RBP	13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NR2F2	P24468	414 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NMT1	P30419	496 aa	Known RBP	13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	KCNJ6	P48051	423 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	CASP5	P51878	434 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NPEPPS	P55786	919 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	IRF5	Q13568	498 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	LAMC2	Q13753	1193 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	LY6K	Q17RY6	165 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	FAM102B	Q5T8I3	360 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	ARMCX5	Q6P1M9	558 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	CCDC62	Q6P9F0	684 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	PLPPR4	Q7Z2D5	763 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	IFNL1	Q8IU54	200 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	SYCP3	Q8IZU3	236 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	DAW1	Q8N136	415 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	SPIRE2	Q8WWL2	714 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	IFT74	Q96LB3	600 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	PANX2	Q96RD6	677 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	FIZ1	Q96SL8	496 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NTPCR	Q9BSD7	190 aa	Known RBP	13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	STRA6	Q9BX79	667 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NAA15	Q9BXJ9	866 aa	Known RBP	13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	GBP3	Q9H0R5	595 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	NDST4	Q9H3R1	872 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	BCAS3	Q9H6U6	928 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147	ATP6V0A4	Q9HBG4	840 aa		13.54	□□□□□ -0.24
RBM17-211	ENST00000481147		K7ENM7	598 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	SLC16A3	O15427	465 aa	Known RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	CCP110	O43303	1012 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	STX10	O60499	249 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	LGR5	O75473	907 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	NR3C1	P04150	777 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	TCF7	P36402	384 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	GTF2B	Q00403	316 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	LRMP	Q12912	555 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	DMP1	Q13316	513 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	TSR1	Q2NL82	804 aa	Known RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	PLA2G4F	Q68DD2	849 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	MAEA	Q7L5Y9	396 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	HAUS6	Q7Z4H7	955 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	BBX	Q8WY36	941 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	SPATA33	Q96N06	139 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	ERGIC2	Q96RQ1	377 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	GPR20	Q99678	358 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	JPH2	Q9BR39	696 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	MKNK1	Q9BUB5	465 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	ABHD16B	Q9H3Z7	469 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	SMARCAD1	Q9H4L7	1026 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	POLD4	Q9HCU8	107 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	PDLIM7	Q9NR12	457 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	PLXNB2	O15031	1838 aa		13.53	□□□□□ -0.24
RBM17-211	ENST00000481147	MYH9	P35579	1960 aa	Known RBP	13.52	□□□□□ -0.24
RBM17-211	ENST00000481147	MYH11	P35749	1972 aa		13.52	□□□□□ -0.24
RBM17-211	ENST00000481147	TMEM88B	A6NKF7	163 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	NKRF	O15226	690 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	TLR2	O60603	784 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	PPP1R37	O75864	691 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	GH1	P01241	217 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	EPB41	P11171	864 aa	Known RBP	13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	HOXD13	P35453	343 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	PSMC2	P35998	433 aa	Known RBP	13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	TM4SF4	P48230	202 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	POLG	P54098	1239 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	NCKAP1L	P55160	1127 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	PEX3	P56589	373 aa		13.52	□□□□□ -0.25
RBM17-211	ENST00000481147	CCZ1B	P86790	482 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms