RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SLFN12LQ6IEE8 588 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 KIAA1841Q6NSI8 718 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 KCNK18Q7Z418 384 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 PNMA8AQ86V59 439 aaPredicted RBP6.9□□□□□ -1.3
UPF3A-207ENST00000481131 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 WDR75Q8IWA0 830 aaKnown RBP6.9□□□□□ -1.3
UPF3A-207ENST00000481131 CPA6Q8N4T0 437 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 JADE3Q92613 823 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 C8orf48Q96LL4 319 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 QRSL1Q9H0R6 528 aaKnown RBP6.9□□□□□ -1.3
UPF3A-207ENST00000481131 DNAJC28Q9NX36 388 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 MBD1Q9UIS9 605 aaPredicted RBP6.9□□□□□ -1.3
UPF3A-207ENST00000481131 EDARQ9UNE0 448 aa6.9□□□□□ -1.3
UPF3A-207ENST00000481131 XPOTO43592 962 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 RFPL1O75677 317 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 SNUPNO95149 360 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 LPLP06858 475 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 NCAM1P13591 858 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 CCND1P24385 295 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 MTNR1BP49286 362 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 JAG1P78504 1218 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 ROM1Q03395 351 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 ADCY2Q08462 1091 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 TRIM25Q14258 630 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 RTP5Q14D33 572 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 UGT8Q16880 541 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 SKIDA1Q1XH10 827 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 FAM102BQ5T8I3 360 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 TIGD7Q6NT04 549 aaPredicted RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 MPZL3Q6UWV2 235 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 SMARCC2Q8TAQ2 1214 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 DDX11Q96FC9 970 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 TEKT5Q96M29 485 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 NSUN3Q9H649 340 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 NGRNQ9NPE2 291 aaKnown RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 ZNF277Q9NRM2 450 aaPredicted RBP6.89□□□□□ -1.31
UPF3A-207ENST00000481131 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
UPF3A-207ENST00000481131 KLHL33A6NCF5 533 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 PEX10O60683 326 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 IL18BPO95998 194 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 PFKMP08237 780 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 OSMP13725 252 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 AGXTP21549 392 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 IGFBP6P24592 240 aaPredicted RBP6.88□□□□□ -1.31
UPF3A-207ENST00000481131 ECE1P42892 770 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 NOLC1Q14978 699 aaKnown RBP eCLIP6.88□□□□□ -1.31
UPF3A-207ENST00000481131 CLUL1Q15846 466 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 NXNQ6DKJ4 435 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 B3GNT8Q7Z7M8 397 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 C14orf80Q86SX3 495 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 SLC41A1Q8IVJ1 513 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 TPH2Q8IWU9 490 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 TCEAL8Q8IYN2 117 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 MYO1HQ8N1T3 1032 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 FERMT2Q96AC1 680 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 GORASP1Q9BQQ3 440 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
UPF3A-207ENST00000481131 C8AP07357 584 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 CELA3BP08861 270 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 CYP2C8P10632 490 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 PF4V1P10720 104 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 EPHB3P54753 998 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 ITGA1P56199 1179 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 ADAM9Q13443 819 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 ACAP2Q15057 778 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 KANK2Q63ZY3 851 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 STK32CQ86UX6 486 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 SGPP1Q9BX95 441 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 OR10A5Q9H207 317 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 SIRT5Q9NXA8 310 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 KCNG1Q9UIX4 513 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 DENND2AQ9ULE3 1009 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 GPR45Q9Y5Y3 372 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 MRFAP1Q9Y605 127 aa6.87□□□□□ -1.31
UPF3A-207ENST00000481131 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 C5AR1P21730 350 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 GLRBP48167 497 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 IL13RA1P78552 427 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 MRPS9P82933 396 aaKnown RBP6.86□□□□□ -1.31
UPF3A-207ENST00000481131 TCIRG1Q13488 830 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 STILQ15468 1287 aa6.86□□□□□ -1.31
UPF3A-207ENST00000481131 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
UPF3A-207ENST00000481131 TTC8Q8TAM2 541 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms