RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 RFC2P35250 354 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 LONP1P36776 959 aaKnown RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 RARRES1P49788 294 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 GPNMBQ14956 572 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 C9orf50Q5SZB4 431 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 CABP7Q86V35 215 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 SLC7A3Q8WY07 619 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 ZNF668Q96K58 619 aaPredicted RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 AK8Q96MA6 479 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 PLIN2Q99541 437 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 GINS2Q9Y248 185 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 SRPRBQ9Y5M8 271 aaKnown RBP16.89■□□□□ 0.29
ABCF3-213ENST00000480539 TRPV2Q9Y5S1 764 aa16.89■□□□□ 0.29
ABCF3-213ENST00000480539 IGKV6-21A0A0C4DH24 114 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 E9PMD0 336 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 SPTLC2O15270 562 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 YEATS4O95619 227 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 RPLP2P05387 115 aaKnown RBP16.88■□□□□ 0.29
ABCF3-213ENST00000480539 GHRP10912 638 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 MUTP22033 750 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 TMOD1P28289 359 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 BMP8BP34820 402 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 RFC5P40937 340 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 GRB10Q13322 594 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-213ENST00000480539 KIZQ2M2Z5 673 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 FAM26DQ5JW98 314 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 TMEM240Q5SV17 173 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 KCNK18Q7Z418 384 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 KRI1Q8N9T8 703 aaKnown RBP16.88■□□□□ 0.29
ABCF3-213ENST00000480539 CDK5RAP3Q96JB5 506 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 PNMA5Q96PV4 448 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 NACC1Q96RE7 527 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 DHX33Q9H6R0 707 aaKnown RBP16.88■□□□□ 0.29
ABCF3-213ENST00000480539 PPME1Q9Y570 386 aa16.88■□□□□ 0.29
ABCF3-213ENST00000480539 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 UBA7P41226 1012 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
ABCF3-213ENST00000480539 TCTN1Q2MV58 587 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 TMEM119Q4V9L6 283 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 IER5Q5VY09 327 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 TDHQ8IZJ6 230 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 RASSF8Q8NHQ8 419 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 SYMPKQ92797 1274 aaKnown RBP16.87■□□□□ 0.29
ABCF3-213ENST00000480539 TMEM143Q96AN5 459 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 SCLT1Q96NL6 688 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 OSMRQ99650 979 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 MTRQ99707 1265 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-213ENST00000480539 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 CDHR5Q9HBB8 845 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 XPNPEP1Q9NQW7 623 aa16.87■□□□□ 0.29
ABCF3-213ENST00000480539 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
ABCF3-213ENST00000480539 MORC2Q9Y6X9 1032 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-213ENST00000480539 PARNO95453 639 aaKnown RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 CXCL10P02778 98 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 PFKMP08237 780 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 DNM2P50570 870 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 NUCB2P80303 420 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 LPIN1Q14693 890 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 SHHQ15465 462 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 FBXO47Q5MNV8 452 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 HYIQ5T013 277 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 USP49Q70CQ1 688 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 NME8Q8N427 588 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 EPSTI1Q96J88 318 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 CELF4Q9BZC1 486 aaKnown RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 SUCLA2Q9P2R7 463 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
ABCF3-213ENST00000480539 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 EVPLQ92817 2033 aa16.86■□□□□ 0.29
ABCF3-213ENST00000480539 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 PPP6R2O75170 966 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 GPR32O75388 356 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 DGAT1O75907 488 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 EYA4O95677 639 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 FGBP02675 491 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 XRCC6P12956 609 aaKnown RBP eCLIP16.85■□□□□ 0.29
ABCF3-213ENST00000480539 PLCG1P19174 1290 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 GPC3P51654 580 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 NLRP11P59045 1033 aaKnown RBP16.85■□□□□ 0.29
ABCF3-213ENST00000480539 KRT85P78386 507 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 LRRC15Q8TF66 581 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 TMEM40Q8WWA1 233 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 NLRP7Q8WX94 980 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 CALML4Q96GE6 196 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms