RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ZDHHC9Q9Y397 364 aa10.19□□□□□ -0.78
VCP-206ENST00000480327 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
VCP-206ENST00000480327 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
VCP-206ENST00000480327 EVPLQ92817 2033 aa10.19□□□□□ -0.78
VCP-206ENST00000480327 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
VCP-206ENST00000480327 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 H3BNC9 293 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 H3BQ06 376 aaPredicted RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 BACH1O14867 736 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 UPP2O95045 317 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 CHRNA1P02708 482 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 OR52Z1P0C646 297 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 LTBRP36941 435 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 MGAT3Q09327 533 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 SF3A1Q15459 793 aaKnown RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 TCEAL5Q5H9L2 206 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 NCAPH2Q6IBW4 605 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 RUFY4Q6ZNE9 571 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 TRMT1LQ7Z2T5 733 aaKnown RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 MIER3Q7Z3K6 550 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 SLFN12Q8IYM2 578 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 C4orf32Q8N8J7 132 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 SEPT1Q8WYJ6 367 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 CHAMP1Q96JM3 812 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 FAM20AQ96MK3 541 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 MTMR9Q96QG7 549 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 RIT2Q99578 217 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 TTC12Q9H892 705 aaPredicted RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 TFIP11Q9UBB9 837 aaKnown RBP10.18□□□□□ -0.78
VCP-206ENST00000480327 CLIC4Q9Y696 253 aa10.18□□□□□ -0.78
VCP-206ENST00000480327 EML1O00423 815 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 TBX3O15119 743 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 CAND2O75155 1236 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 BRD1O95696 1058 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 PDIA4P13667 645 aaKnown RBP10.17□□□□□ -0.78
VCP-206ENST00000480327 MARK3P27448 753 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 TECP42680 631 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 KRT76Q01546 638 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 GPM6BQ13491 265 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
VCP-206ENST00000480327 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 MIS18BP1Q6P0N0 1132 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 ABHD15Q6UXT9 468 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 TMEM192Q8IY95 271 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 GJD3Q8N144 294 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 SEPT8Q92599 483 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 GLG1Q92896 1179 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 ZBTB10Q96DT7 871 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 USP28Q96RU2 1077 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 PCYT2Q99447 389 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 DISC1Q9NRI5 854 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 VAV3Q9UKW4 847 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 PIEZO1Q92508 2521 aa10.17□□□□□ -0.78
VCP-206ENST00000480327 TECTAO75443 2155 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 POTEMA6NI47 508 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 PSAPP07602 524 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 DDIT3P35638 169 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 JAK3P52333 1124 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 ORC2Q13416 577 aaPredicted RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 LPIN1Q14693 890 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 IL17AQ16552 155 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 MARCH8Q5T0T0 291 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 CCDC60Q8IWA6 550 aaPredicted RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 LINC01599Q8WXQ3 324 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 PABPC5Q96DU9 382 aaKnown RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 IPO9Q96P70 1041 aaKnown RBP10.16□□□□□ -0.78
VCP-206ENST00000480327 YME1L1Q96TA2 773 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 AZI2Q9H6S1 392 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 ZNF302Q9NR11 478 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 GABBR1Q9UBS5 961 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 PCDHA10Q9Y5I2 948 aa10.16□□□□□ -0.78
VCP-206ENST00000480327 KMT2EQ8IZD2 1858 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 VWA3AA6NCI4 1184 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 C5orf67F2Z3F1 127 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 GRM6O15303 877 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 ATG7O95352 703 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 GHRP10912 638 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 MARCKSP29966 332 aaPredicted RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 SFNP31947 248 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 GTF2F1P35269 517 aaKnown RBP eCLIP10.15□□□□□ -0.78
VCP-206ENST00000480327 STAT5BP51692 787 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 NUCB2P80303 420 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 ATP2C1P98194 919 aaPredicted RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 ZP2Q05996 745 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 PPP2R5CQ13362 524 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 CAMK1Q14012 370 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 UGCGQ16739 394 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms