RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 M0QZ92 97 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 M0R2C6 588 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
USP11-208ENST00000480104 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.2
USP11-208ENST00000480104 CFBP00751 764 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 SP4Q02446 784 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 PGM5Q15124 567 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 LRRC43Q8N309 656 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 ST13P5Q8NFI4 369 aaPredicted RBP13.83□□□□□ -0.2
USP11-208ENST00000480104 APPBP2Q92624 585 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 GATA6Q92908 595 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 DDX23Q9BUQ8 820 aaKnown RBP13.83□□□□□ -0.2
USP11-208ENST00000480104 FAM126AQ9BYI3 521 aaPredicted RBP13.83□□□□□ -0.2
USP11-208ENST00000480104 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 ZBP1Q9H171 429 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 C1orf112Q9NSG2 853 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 C2orf16Q68DN1 1984 aa13.83□□□□□ -0.2
USP11-208ENST00000480104 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 KCNK5O95279 499 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 GOLGA8HP0CJ92 632 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 MARK3P27448 753 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 MAGEA9P43362 315 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 HSD17B4P51659 736 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 LIMK1P53667 647 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 IGBP1P78318 339 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 SNW1Q13573 536 aaKnown RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 AASDHQ4L235 1098 aaPredicted RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 VPS52Q8N1B4 723 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 CELF5Q8N6W0 485 aaKnown RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
USP11-208ENST00000480104 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 NACAP1Q9BZK3 213 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 NAPBQ9H115 298 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 RNF19AQ9NV58 838 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 CELSR3Q9NYQ7 3312 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 CLUHO75153 1309 aa13.82□□□□□ -0.2
USP11-208ENST00000480104 OPLAHO14841 1288 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 FOXC1Q12948 553 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 HTR4Q13639 388 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 WTAPQ15007 396 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 MLF2Q15773 248 aaPredicted RBP13.81□□□□□ -0.2
USP11-208ENST00000480104 PSAPL1Q6NUJ1 521 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
USP11-208ENST00000480104 STAMQ92783 540 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
USP11-208ENST00000480104 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 WDR6Q9NNW5 1121 aaKnown RBP13.81□□□□□ -0.2
USP11-208ENST00000480104 LTB4R2Q9NPC1 389 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
USP11-208ENST00000480104 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
USP11-208ENST00000480104 KAT6AQ92794 2004 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 FOXD2O60548 495 aaPredicted RBP13.8□□□□□ -0.2
USP11-208ENST00000480104 RPLP2P05387 115 aaKnown RBP13.8□□□□□ -0.2
USP11-208ENST00000480104 SNHG28P0DPA3 235 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 TDGF1P13385 188 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 CD72P21854 359 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 CCND2P30279 289 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 METAP2P50579 478 aaKnown RBP eCLIP13.8□□□□□ -0.2
USP11-208ENST00000480104 GPC5P78333 572 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 SEMA3FQ13275 785 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 NEDD9Q14511 834 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 CCDC6Q16204 474 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 KIF1BPQ96EK5 621 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 IGSF5Q9NSI5 407 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 IRAK3Q9Y616 596 aa13.8□□□□□ -0.2
USP11-208ENST00000480104 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
USP11-208ENST00000480104 CTSAP10619 480 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
USP11-208ENST00000480104 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 STOX1Q6ZVD7 989 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
USP11-208ENST00000480104 PPFIBP1Q86W92 1011 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 CLDN23Q96B33 292 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 RXFP3Q9NSD7 469 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 NOC2LQ9Y3T9 749 aaKnown RBP13.79□□□□□ -0.2
USP11-208ENST00000480104 KDM3AQ9Y4C1 1321 aa13.79□□□□□ -0.2
USP11-208ENST00000480104 USP9XQ93008 2570 aaPredicted RBP13.78□□□□□ -0.2
USP11-208ENST00000480104 CFAP46Q8IYW2 2715 aa13.78□□□□□ -0.2
USP11-208ENST00000480104 TARSP26639 723 aaKnown RBP13.78□□□□□ -0.2
USP11-208ENST00000480104 TCF7P36402 384 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms