RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 MAP9Q49MG5 647 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 HABP4Q5JVS0 413 aaKnown RBP4.75□□□□□ -1.65
NF1-209ENST00000479536 OTOP3Q7RTS5 596 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 LIMS2Q7Z4I7 341 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 PTRH1Q86Y79 214 aaKnown RBP4.75□□□□□ -1.65
NF1-209ENST00000479536 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 PSMD1Q99460 953 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 VPS11Q9H270 941 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 EPB41L1Q9H4G0 881 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 FBLN5Q9UBX5 448 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 TSC22D4Q9Y3Q8 395 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 SPO11Q9Y5K1 396 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 X6R8D5 127 aa4.75□□□□□ -1.65
NF1-209ENST00000479536 GOLGA6CA6NDK9 693 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 GOLGA6BA6NDN3 693 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 C22orf46C9J442 243 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 MAN2B1O00754 1011 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 DVL2O14641 736 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 NKRFO15226 690 aaKnown RBP eCLIP4.74□□□□□ -1.65
NF1-209ENST00000479536 TPD52L2O43399 206 aaKnown RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 SNUPNO95149 360 aaKnown RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 FUCA1P04066 466 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 KRT18P05783 430 aaKnown RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 CT47B1P0C2W7 299 aaPredicted RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 GOLGA6DP0CG33 693 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 PHC1P78364 1004 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 SMAD3P84022 425 aaKnown RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 KIAA2012Q0VF49 1180 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 PCBP2Q15366 365 aaKnown RBP eCLIP4.74□□□□□ -1.65
NF1-209ENST00000479536 CDSNQ15517 529 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 SMAD2Q15796 467 aaKnown RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 FSTL4Q6MZW2 842 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 PGM2L1Q6PCE3 622 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 NOSTRINQ8IVI9 506 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 LGI4Q8N135 537 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 MAGEB6Q8N7X4 407 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 C1orf162Q8NEQ5 155 aaPredicted RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 NLGN2Q8NFZ4 835 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 PLEKHO2Q8TD55 490 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 FAXDC2Q96IV6 333 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 ZNF747Q9BV97 191 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 SSBP3Q9BWW4 388 aaPredicted RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 PCIF1Q9H4Z3 704 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 TCF7L1Q9HCS4 588 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 TOMM22Q9NS69 142 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 GOLGA6AQ9NYA3 693 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.74□□□□□ -1.65
NF1-209ENST00000479536 COA3Q9Y2R0 106 aaPredicted RBP4.74□□□□□ -1.65
NF1-209ENST00000479536 RIPOR2Q9Y4F9 1068 aa4.74□□□□□ -1.65
NF1-209ENST00000479536 PLEKHD1A6NEE1 506 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 HIP1RO75146 1068 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CFBP00751 764 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 AMHP03971 560 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 RBP3P10745 1247 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 LSP1P33241 339 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 RECQLP46063 649 aaPredicted RBP4.73□□□□□ -1.65
NF1-209ENST00000479536 SCAND1P57086 179 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CORO7P57737 925 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 RHBDL3P58872 404 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 KRT85P78386 507 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 TCIRG1Q13488 830 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 HLTFQ14527 1009 aaKnown RBP eCLIP4.73□□□□□ -1.65
NF1-209ENST00000479536 FIGNQ5HY92 759 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 TMEM240Q5SV17 173 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 GPR158Q5T848 1215 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 MROH9Q5TGP6 573 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CXorf57Q6NSI4 855 aaKnown RBP4.73□□□□□ -1.65
NF1-209ENST00000479536 BORAQ6PGQ7 559 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 EP400NLQ6ZTU2 488 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 PNMA8AQ86V59 439 aaPredicted RBP4.73□□□□□ -1.65
NF1-209ENST00000479536 RASSF3Q86WH2 238 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CERS3Q8IU89 383 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CMIPQ8IY22 773 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 CPA6Q8N4T0 437 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 LZTR1Q8N653 840 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 ZNF610Q8N9Z0 462 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 PIP4K2CQ8TBX8 421 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 SH3RF2Q8TEC5 729 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.73□□□□□ -1.65
NF1-209ENST00000479536 PMM1Q92871 262 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 MTA3Q9BTC8 594 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 PCED1AQ9H1Q7 454 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 SLC6A20Q9NP91 592 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 TOPORSQ9NS56 1045 aaPredicted RBP4.73□□□□□ -1.65
NF1-209ENST00000479536 MKS1Q9NXB0 559 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 DSEQ9UL01 958 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 SRPK3Q9UPE1 567 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 ZNF652Q9Y2D9 606 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 NOC2LQ9Y3T9 749 aaKnown RBP4.73□□□□□ -1.65
NF1-209ENST00000479536 RWDD3Q9Y3V2 267 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 HS3ST3A1Q9Y663 406 aa4.73□□□□□ -1.65
NF1-209ENST00000479536 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
NF1-209ENST00000479536 GOLGA8BA8MQT2 603 aa4.72□□□□□ -1.65
NF1-209ENST00000479536 SCDO00767 359 aa4.72□□□□□ -1.65
NF1-209ENST00000479536 CLASP2O75122 1294 aaKnown RBP4.72□□□□□ -1.65
NF1-209ENST00000479536 U2AF1L5P0DN76 240 aaPredicted RBP4.72□□□□□ -1.65
NF1-209ENST00000479536 GLI4P10075 376 aa4.72□□□□□ -1.65
NF1-209ENST00000479536 PF4V1P10720 104 aa4.72□□□□□ -1.65
NF1-209ENST00000479536 KIF11P52732 1056 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms