RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
HOXB3-209ENST00000478644 SMYD4Q8IYR2 804 aaPredicted RBP7.47□□□□□ -1.21
HOXB3-209ENST00000478644 TRIB2Q92519 343 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 KRTAP4-12Q9BQ66 201 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 CEP44Q9C0F1 390 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 SPATC1LQ9H0A9 340 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 PRO3102Q9H379 93 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 BOLA2Q9H3K6 86 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 MKNK2Q9HBH9 465 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 TXNRD2Q9NNW7 524 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.47□□□□□ -1.21
HOXB3-209ENST00000478644 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 SLC4A4Q9Y6R1 1079 aa7.47□□□□□ -1.21
HOXB3-209ENST00000478644 DNM1LO00429 736 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 ENC1O14682 589 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 SEPT4O43236 478 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 FLOT1O75955 427 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 MBD4O95243 580 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 COL6A1P12109 1028 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 TAL1P17542 331 aaPredicted RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 MAPK8P45983 427 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 CDK8P49336 464 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 PDE4BQ07343 736 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 SEPT2Q15019 361 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 LRIT3Q3SXY7 679 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 CYP27C1Q4G0S4 372 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 ANKRD45Q5TZF3 282 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 WDR78Q5VTH9 848 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 SMC5Q8IY18 1101 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 ZNF444Q8N0Y2 327 aaPredicted RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 LCORLQ8N3X6 602 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 GDF15Q99988 308 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 PORCNQ9H237 461 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 NYAP2Q9P242 653 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 ZC3H7BQ9UGR2 993 aaKnown RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 FBXO40Q9UH90 709 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 DDX20Q9UHI6 824 aaKnown RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 PCOLCE2Q9UKZ9 415 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 ADAMTS5Q9UNA0 930 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 CTDP1Q9Y5B0 961 aaPredicted RBP7.46□□□□□ -1.22
HOXB3-209ENST00000478644 CDK5RAP2Q96SN8 1893 aa7.46□□□□□ -1.22
HOXB3-209ENST00000478644 KBTBD13C9JR72 458 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 ATP2A1O14983 1001 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 RNF113AO15541 343 aaKnown RBP7.45□□□□□ -1.22
HOXB3-209ENST00000478644 CNMDO75829 334 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 IGHDP01880 384 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 GUCY1A2P33402 732 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 STAT3P40763 770 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 OAZ1P54368 228 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 JAG1P78504 1218 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 RING1Q06587 406 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 TTLL4Q14679 1199 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 KCTD2Q14681 263 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 ZYXQ15942 572 aaKnown RBP7.45□□□□□ -1.22
HOXB3-209ENST00000478644 CTR9Q6PD62 1173 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 TDHQ8IZJ6 230 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 ACER1Q8TDN7 264 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 SDR42E1Q8WUS8 393 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 APPBP2Q92624 585 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 KCNB2Q92953 911 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 MKL1Q969V6 931 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 FRMD6Q96NE9 622 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 LBHD1Q9BQE6 289 aaPredicted RBP7.45□□□□□ -1.22
HOXB3-209ENST00000478644 MOV10L1Q9BXT6 1211 aaKnown RBP7.45□□□□□ -1.22
HOXB3-209ENST00000478644 ARMT1Q9H993 441 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 STAP2Q9UGK3 403 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 SALL3Q9BXA9 1300 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 SIPA1L1O43166 1804 aa7.45□□□□□ -1.22
HOXB3-209ENST00000478644 DDX60LQ5H9U9 1706 aaKnown RBP7.44□□□□□ -1.22
HOXB3-209ENST00000478644 ZSWIM8A7E2V4 1837 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 PLA2G6O60733 806 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 ZBED4O75132 1171 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 MX1P20591 662 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 ADORA2AP29274 412 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 CNGA1P29973 690 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 NUCB1Q02818 461 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 COL19A1Q14993 1142 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 FAM109BQ6ICB4 259 aaPredicted RBP7.44□□□□□ -1.22
HOXB3-209ENST00000478644 RCSD1Q6JBY9 416 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 CBLL1Q75N03 491 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 RNF180Q86T96 592 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 PI4K2BQ8TCG2 481 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 OTUD7AQ8TE49 926 aaPredicted RBP7.44□□□□□ -1.22
HOXB3-209ENST00000478644 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 STRBPQ96SI9 672 aaKnown RBP7.44□□□□□ -1.22
HOXB3-209ENST00000478644 MAF1Q9H063 256 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 BCL11AQ9H165 835 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 BTBD7Q9P203 1132 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 FEM1BQ9UK73 627 aa7.44□□□□□ -1.22
HOXB3-209ENST00000478644 SAMM50Q9Y512 469 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms