RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 TPCN1Q9ULQ1 816 aa25.76■■□□□ 1.71
C9orf3-216ENST00000478603 AKT3Q9Y243 479 aa25.76■■□□□ 1.71
C9orf3-216ENST00000478603 CYP3A7-CYP3A51PA0A087WV96 503 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 GPR182O15218 404 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 MAGEB2O15479 319 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 CYP3A7P24462 503 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 SFNP31947 248 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 JAK3P52333 1124 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 INF2Q27J81 1249 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 LINC01465Q8N7H1 131 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 ZNF668Q96K58 619 aaPredicted RBP25.75■■□□□ 1.71
C9orf3-216ENST00000478603 PLVAPQ9BX97 442 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 LMAN2LQ9H0V9 348 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 SLKQ9H2G2 1235 aaPredicted RBP25.75■■□□□ 1.71
C9orf3-216ENST00000478603 RGS18Q9NS28 235 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 PLAGL2Q9UPG8 496 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 PCDHB7Q9Y5E2 793 aa25.75■■□□□ 1.71
C9orf3-216ENST00000478603 IL9P15248 144 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 NLRP11P59045 1033 aaKnown RBP25.74■■□□□ 1.71
C9orf3-216ENST00000478603 NONOQ15233 471 aaKnown RBP eCLIP25.74■■□□□ 1.71
C9orf3-216ENST00000478603 ODR4Q5SWX8 454 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 GALNT17Q6IS24 598 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 MIER3Q7Z3K6 550 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 NEK9Q8TD19 979 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 PABPC5Q96DU9 382 aaKnown RBP25.74■■□□□ 1.71
C9orf3-216ENST00000478603 MAP7D2Q96T17 732 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 PLXNA4Q9HCM2 1894 aa25.74■■□□□ 1.71
C9orf3-216ENST00000478603 C9IYK1 514 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 CAMK1Q14012 370 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 FAM102BQ5T8I3 360 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 PTCRAQ6ISU1 281 aaPredicted RBP25.73■■□□□ 1.71
C9orf3-216ENST00000478603 ETNPPLQ8TBG4 499 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 MBOAT7Q96N66 472 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 PHF20Q9BVI0 1012 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 CD320Q9NPF0 282 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 C1orf112Q9NSG2 853 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 CLDND1Q9NY35 253 aa25.73■■□□□ 1.71
C9orf3-216ENST00000478603 TMEM150BA6NC51 233 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 SLC37A4O43826 429 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 PFKFB2O60825 505 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 CDKL5O76039 1030 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 MMP1P03956 469 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 ITGB1P05556 798 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 DNAJB1P25685 340 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 TMOD1P28289 359 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 COL19A1Q14993 1142 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 B3GNT9Q6UX72 402 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 SLC24A5Q71RS6 500 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 KRT25Q7Z3Z0 450 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 FAM177A1Q8N128 213 aaPredicted RBP25.72■■□□□ 1.71
C9orf3-216ENST00000478603 KLHL23Q8NBE8 558 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 P2RX5Q93086 422 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 ADAMTS10Q9H324 1103 aa25.72■■□□□ 1.71
C9orf3-216ENST00000478603 DDX25Q9UHL0 483 aaKnown RBP25.72■■□□□ 1.71
C9orf3-216ENST00000478603 TBKBP1A7MCY6 615 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 GTF2F1P35269 517 aaKnown RBP eCLIP25.71■■□□□ 1.717e-6■■■■□ 21.3
C9orf3-216ENST00000478603 HYAL1Q12794 435 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 DSC3Q14574 896 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 LETM2Q2VYF4 491 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 MOXD1Q6UVY6 613 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 RDM1Q8NG50 284 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 SPPL3Q8TCT6 385 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 KHSRPQ92945 711 aaKnown RBP eCLIP25.71■■□□□ 1.716e-6■■■■□ 21
C9orf3-216ENST00000478603 SH2D3AQ9BRG2 576 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 EPHX3Q9H6B9 360 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 HCSTQ9UBK5 93 aa25.71■■□□□ 1.71
C9orf3-216ENST00000478603 SEPT9Q9UHD8 586 aaPredicted RBP25.71■■□□□ 1.71
C9orf3-216ENST00000478603 STK36Q9NRP7 1315 aa25.7■■□□□ 1.71
C9orf3-216ENST00000478603 GRXCR2A6NFK2 248 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 CTDNEP1O95476 244 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 AK2P54819 239 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 TBC1D8BQ0IIM8 1120 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 TARBP2Q15633 366 aaKnown RBP25.7■■□□□ 1.7
C9orf3-216ENST00000478603 MTERF2Q49AM1 385 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 IGFLR1Q9H665 355 aa25.7■■□□□ 1.7
C9orf3-216ENST00000478603 CCDC194A0A1B0GVG4 234 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 STBD1O95210 358 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 FGFR1P11362 822 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 COL9A1P20849 921 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 LTBRP36941 435 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 GPC3P51654 580 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 ANAPC15P60006 121 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 DRP2Q13474 957 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 NAALADL2Q58DX5 795 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 SPOUT1Q5T280 376 aaKnown RBP25.69■■□□□ 1.7
C9orf3-216ENST00000478603 FAM178BQ8IXR5 827 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 OXER1Q8TDS5 423 aa25.69■■□□□ 1.7
C9orf3-216ENST00000478603 FGFR4P22455 802 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 EIF4BP23588 611 aaKnown RBP25.68■■□□□ 1.7
C9orf3-216ENST00000478603 IRS1P35568 1242 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 FAM189BP81408 668 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 DLX2Q07687 328 aaPredicted RBP25.68■■□□□ 1.7
C9orf3-216ENST00000478603 XKR3Q5GH77 459 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 FAM43BQ6ZT52 329 aaPredicted RBP25.68■■□□□ 1.7
C9orf3-216ENST00000478603 POF1BQ8WVV4 589 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 SCLT1Q96NL6 688 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 CEP89Q96ST8 783 aa25.68■■□□□ 1.7
C9orf3-216ENST00000478603 NIFKQ9BYG3 293 aaKnown RBP25.68■■□□□ 1.7
C9orf3-216ENST00000478603 ATP6V0A4Q9HBG4 840 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms