RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 HOMER1Q86YM7 354 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 TRIM22Q8IYM9 498 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 ERVK-5Q9HDB9 667 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
USP11-207ENST00000478596 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
USP11-207ENST00000478596 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
USP11-207ENST00000478596 SQORQ9Y6N5 450 aa16.51■□□□□ 0.23
USP11-207ENST00000478596 NOP56O00567 594 aaKnown RBP16.5■□□□□ 0.23
USP11-207ENST00000478596 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
USP11-207ENST00000478596 SCG2P13521 617 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 CD52P31358 61 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 GATMP50440 423 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 HSD17B4P51659 736 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 ATXN1P54253 815 aaKnown RBP16.5■□□□□ 0.23
USP11-207ENST00000478596 SCRN1Q12765 414 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
USP11-207ENST00000478596 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 VAT1LQ9HCJ6 419 aa16.5■□□□□ 0.23
USP11-207ENST00000478596 NGRNQ9NPE2 291 aaKnown RBP16.5■□□□□ 0.23
USP11-207ENST00000478596 MYO10Q9HD67 2058 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 CDC27P30260 824 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 EVCP57679 992 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 PLPP4Q5VZY2 271 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 SIX5Q8N196 739 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 SUMF1Q8NBK3 374 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 SNX21Q969T3 373 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
USP11-207ENST00000478596 GPR20Q99678 358 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 TCF25Q9BQ70 676 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 SLC26A6Q9BXS9 759 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
USP11-207ENST00000478596 CNTNAP5Q8WYK1 1306 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 HIDE1A8MVS5 230 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 ADRB1P08588 477 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 PLCB3Q01970 1234 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 TDGQ13569 410 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
USP11-207ENST00000478596 CYP26B1Q9NR63 512 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 MAP3K20Q9NYL2 800 aaKnown RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 PUF60Q9UHX1 559 aaKnown RBP16.48■□□□□ 0.23
USP11-207ENST00000478596 LRFN2Q9ULH4 789 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 DUSP12Q9UNI6 340 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 HCFC2Q9Y5Z7 792 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 GPR179Q6PRD1 2367 aa16.48■□□□□ 0.23
USP11-207ENST00000478596 MBLAC1A4D2B0 266 aaPredicted RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 EOMESO95936 686 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 CFBP00751 764 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 PGM5Q15124 567 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 SPOUT1Q5T280 376 aaKnown RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 KIAA1841Q6NSI8 718 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 GPR161Q8N6U8 529 aaKnown RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 COLGALT1Q8NBJ5 622 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 PHKBQ93100 1093 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 SPZ1Q9BXG8 430 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 ENTPD7Q9NQZ7 604 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 FBXL21Q9UKT6 434 aa16.47■□□□□ 0.23
USP11-207ENST00000478596 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
USP11-207ENST00000478596 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 OPLAHO14841 1288 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 SP9P0CG40 484 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 MRPS6P82932 125 aaKnown RBP16.46■□□□□ 0.23
USP11-207ENST00000478596 NEDD9Q14511 834 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 QRICH1Q2TAL8 776 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 SRBD1Q8N5C6 995 aaKnown RBP16.46■□□□□ 0.23
USP11-207ENST00000478596 IL31RAQ8NI17 732 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
USP11-207ENST00000478596 TUBE1Q9UJT0 475 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 RBM19Q9Y4C8 960 aaKnown RBP16.46■□□□□ 0.23
USP11-207ENST00000478596 FAM208BQ5VWN6 2430 aa16.46■□□□□ 0.23
USP11-207ENST00000478596 PRR5-ARHGAP8B1AHC4 643 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 IFNAR1P17181 557 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 CCND2P30279 289 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 SARSP49591 514 aaKnown RBP16.45■□□□□ 0.22
USP11-207ENST00000478596 FOSBP53539 338 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 ARHGAP8P85298 464 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms