RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 GJB5O95377 273 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 AMHP03971 560 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 CA3P07451 260 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 DRP2Q13474 957 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 GRIN2CQ14957 1233 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 TMEM266Q2M3C6 531 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 USP38Q8NB14 1042 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 ZNF668Q96K58 619 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-206ENST00000478214 CDX2Q99626 313 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-206ENST00000478214 OSMRQ99650 979 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 PADI3Q9ULW8 664 aa17.46■□□□□ 0.39
HMGA1-206ENST00000478214 NOC2LQ9Y3T9 749 aaKnown RBP17.46■□□□□ 0.39
HMGA1-206ENST00000478214 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 SIP14410 1827 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 IGKV6-21A0A0C4DH24 114 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
HMGA1-206ENST00000478214 GPR32O75388 356 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 ARHGEF15O94989 841 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 YWHABP31946 246 aaKnown RBP17.45■□□□□ 0.38
HMGA1-206ENST00000478214 TECP42680 631 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 NLRP11P59045 1033 aaKnown RBP17.45■□□□□ 0.38
HMGA1-206ENST00000478214 PAK2Q13177 524 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 PPP2R2DQ66LE6 453 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 CEP170P1Q96L14 293 aa17.45■□□□□ 0.38
HMGA1-206ENST00000478214 LCHNA4D1U4 455 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 ENPP3O14638 875 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 MAFO75444 373 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-206ENST00000478214 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 LYPLA2O95372 231 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-206ENST00000478214 PTGDRQ13258 359 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 NEK9Q8TD19 979 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 MYLIPQ8WY64 445 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 RAD9AQ99638 391 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 ERVK-5Q9HDB9 667 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
HMGA1-206ENST00000478214 EVPLQ92817 2033 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 A0A087WWV3 80 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 UPP2O95045 317 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 SPATA31C1P0DKV0 1188 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 GPC3P51654 580 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
HMGA1-206ENST00000478214 RILPL1Q5EBL4 403 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 OTUD6AQ7L8S5 288 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 RTN4RL1Q86UN2 441 aaPredicted RBP17.43■□□□□ 0.38
HMGA1-206ENST00000478214 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 TOP1MTQ969P6 601 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 SNX21Q969T3 373 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
HMGA1-206ENST00000478214 TMX1Q9H3N1 280 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.43■□□□□ 0.38
HMGA1-206ENST00000478214 BMP2KQ9NSY1 1161 aaPredicted RBP17.43■□□□□ 0.38
HMGA1-206ENST00000478214 ST3GAL5Q9UNP4 418 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 PTPRSQ13332 1948 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 CHD7Q9P2D1 2997 aa17.43■□□□□ 0.38
HMGA1-206ENST00000478214 VPS37CA5D8V6 355 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 DNM2P50570 870 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 TAP1Q03518 808 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 SPRED2Q7Z698 418 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 CATSPER3Q86XQ3 398 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 PIGOQ8TEQ8 1089 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 SLC7A3Q8WY07 619 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 JPH2Q9BR39 696 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 FTHL17Q9BXU8 183 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 DHX33Q9H6R0 707 aaKnown RBP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-206ENST00000478214 STXBP5LQ9Y2K9 1186 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 PPME1Q9Y570 386 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 MICAL3Q7RTP6 2002 aa17.42■□□□□ 0.38
HMGA1-206ENST00000478214 GBF1Q92538 1859 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 MED24O75448 989 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 PDCP20941 246 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 RFC5P40937 340 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 HTRA4P83105 476 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-206ENST00000478214 ZNF710Q8N1W2 664 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 NLRP7Q8WX94 980 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 SCLT1Q96NL6 688 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 POLR3CQ9BUI4 534 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-206ENST00000478214 TSPYL2Q9H2G4 693 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-206ENST00000478214 CERS4Q9HA82 394 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 TUFT1Q9NNX1 390 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 ANKEF1Q9NU02 776 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
HMGA1-206ENST00000478214 GPR182O15218 404 aa17.4■□□□□ 0.38
HMGA1-206ENST00000478214 MGEA5O60502 916 aa17.4■□□□□ 0.38
HMGA1-206ENST00000478214 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
HMGA1-206ENST00000478214 DARSP14868 501 aaKnown RBP17.4■□□□□ 0.38
HMGA1-206ENST00000478214 EIF4BP23588 611 aaKnown RBP17.4■□□□□ 0.38
HMGA1-206ENST00000478214 EMC2Q15006 297 aa17.4■□□□□ 0.38
HMGA1-206ENST00000478214 IL17AQ16552 155 aa17.4■□□□□ 0.38
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