RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
SMNDC1-205ENST00000477763 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
SMNDC1-205ENST00000477763 APOBEC2Q9Y235 224 aaKnown RBP6.33□□□□□ -1.4
SMNDC1-205ENST00000477763 B8ZZF3 427 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 GPR39O43194 453 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 POLD1P28340 1107 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 ADCYAP1R1P41586 468 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 ADCY1Q08828 1119 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 ATP13A4Q4VNC1 1196 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 LGI4Q8N135 537 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 WDR48Q8TAF3 677 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 CHTF18Q8WVB6 975 aa6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
SMNDC1-205ENST00000477763 SLC9A1P19634 815 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 APEX1P27695 318 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 FAPQ12884 760 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 TOP3AQ13472 1001 aaPredicted RBP6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 LRRC32Q14392 662 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 FERMT3Q86UX7 667 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 SPATS2Q86XZ4 545 aaKnown RBP6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 C20orf173Q96LM9 149 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 SLC5A4Q9NY91 659 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
SMNDC1-205ENST00000477763 A0A0G2JLL6 359 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 UBA6A0AVT1 1052 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 PRLP01236 227 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 PTX3P26022 381 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ETV4P43268 484 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 EVA1CP58658 441 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 PHC1P78364 1004 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 TMPRSS15P98073 1019 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ROM1Q03395 351 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 IQSEC1Q6DN90 963 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ESRP1Q6NXG1 681 aaKnown RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 NECAB2Q7Z6G3 386 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 PLEKHH3Q7Z736 793 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ZDHHC14Q8IZN3 488 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 MAML3Q96JK9 1138 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 EMC7Q9NPA0 242 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 SPTLC3Q9NUV7 552 aa6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
SMNDC1-205ENST00000477763 B4GALT3O60512 393 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 ULK1O75385 1050 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 CD40P25942 277 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 CSF2RBP32927 897 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 ID4P47928 161 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 FAM50AQ14320 339 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 EIF4HQ15056 248 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 SURF1Q15526 300 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 TMEM200BQ69YZ2 307 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 IFNL2Q8IZJ0 200 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 CARD11Q9BXL7 1154 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 USP36Q9P275 1121 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-205ENST00000477763 A0A0G2JNJ9 132 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 TGM5O43548 720 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 RAB11FIP3O75154 756 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 SESN3P58005 492 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 CD83Q01151 205 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 EXOSC10Q01780 885 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 SLC6A3Q01959 620 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 USP10Q14694 798 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 NFIXQ14938 502 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 DDB1Q16531 1140 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 SLFN12LQ6IEE8 588 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 LHFPL2Q6ZUX7 228 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 RALYLQ86SE5 291 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 KBTBD2Q8IY47 623 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 Q9UFV3 132 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 DUSP10Q9Y6W6 482 aa6.28□□□□□ -1.4
SMNDC1-205ENST00000477763 WASHC2CQ9Y4E1 1318 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 LSP1P33241 339 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 CNR2P34972 360 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 CTSWP56202 376 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 MOGSQ13724 837 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 ZNF827Q17R98 1081 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 UBXN11Q5T124 520 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 TIGD7Q6NT04 549 aaPredicted RBP6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 HDGFL2Q7Z4V5 671 aaPredicted RBP6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 C7orf31Q8N865 590 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 ZNF610Q8N9Z0 462 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms