RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 TMEM184AQ6ZMB5 413 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 LURAP1LQ8IV03 231 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 KIAA0319LQ8IZA0 1049 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 C12orf76Q8N812 135 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-204ENST00000477429 NKD2Q969F2 451 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-204ENST00000477429 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 FTHL17Q9BXU8 183 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 JADE2Q9NQC1 790 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 GINS2Q9Y248 185 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 SQORQ9Y6N5 450 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 SMIM35A0A1B0GVV1 85 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 RRN3P2A6NIE6 340 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 PI15O43692 258 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 KLRC1P26715 233 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 FAM189BP81408 668 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 DSC3Q14574 896 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 SPOUT1Q5T280 376 aaKnown RBP11.19□□□□□ -0.62
COL4A5-204ENST00000477429 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
COL4A5-204ENST00000477429 PPP2R3CQ969Q6 453 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
COL4A5-204ENST00000477429 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 SLC9A2Q9UBY0 812 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 ST3GAL5Q9UNP4 418 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 PCDHB7Q9Y5E2 793 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
COL4A5-204ENST00000477429 MYO10Q9HD67 2058 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 IGKV6D-21A0A0A0MT36 114 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 ATG7O95352 703 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 UBE3AQ05086 875 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 KIAA2013Q8IYS2 634 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
COL4A5-204ENST00000477429 CUL5Q93034 780 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 RRP36Q96EU6 259 aaKnown RBP11.18□□□□□ -0.62
COL4A5-204ENST00000477429 CASD1Q96PB1 797 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 PSTPIP2Q9H939 334 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
COL4A5-204ENST00000477429 C2orf71A6NGG8 1288 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 GPR32O75388 356 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 RPS6KA5O75582 802 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 VTNP04004 478 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 STAT5BP51692 787 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 TRAF1Q13077 416 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 CATIPQ7Z7H3 387 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 TMEM173Q86WV6 379 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 CCDC60Q8IWA6 550 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 RASGRP4Q8TDF6 673 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 BCL7CQ8WUZ0 217 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 OSMRQ99650 979 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
COL4A5-204ENST00000477429 HCFC2Q9Y5Z7 792 aa11.17□□□□□ -0.62
COL4A5-204ENST00000477429 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 DHX15O43143 795 aaKnown RBP11.16□□□□□ -0.62
COL4A5-204ENST00000477429 CLASP2O75122 1294 aaKnown RBP11.16□□□□□ -0.62
COL4A5-204ENST00000477429 C22orf31O95567 290 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 NPR3P17342 541 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 CHMLP26374 656 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 CLLU1OSQ5K130 101 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 ABHD15Q6UXT9 468 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 CDCA3Q99618 268 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-204ENST00000477429 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 ENTPD7Q9NQZ7 604 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 LIMD1Q9UGP4 676 aa11.16□□□□□ -0.62
COL4A5-204ENST00000477429 DENND3A2RUS2 1198 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 M0QZ92 97 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 HIP1O00291 1037 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 SH2B2O14492 632 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-204ENST00000477429 EPCAMP16422 314 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 FGFR4P22455 802 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 TRDNQ13061 729 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 RARS2Q5T160 578 aaKnown RBP11.15□□□□□ -0.62
COL4A5-204ENST00000477429 WWC2Q6AWC2 1192 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 TRMT1LQ7Z2T5 733 aaKnown RBP11.15□□□□□ -0.62
COL4A5-204ENST00000477429 NME8Q8N427 588 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 MRPL43Q8N983 215 aaKnown RBP11.15□□□□□ -0.62
COL4A5-204ENST00000477429 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms