RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
COPS3-207ENST00000477299 THPOP40225 353 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 TBC1D8BQ0IIM8 1120 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 DHX8Q14562 1220 aaKnown RBP17.71■□□□□ 0.43
COPS3-207ENST00000477299 GPNMBQ14956 572 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 NAALADL2Q58DX5 795 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 RESP18Q5W5W9 173 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 MAEAQ7L5Y9 396 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 VWCEQ96DN2 955 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
COPS3-207ENST00000477299 DBR1Q9UK59 544 aaKnown RBP17.71■□□□□ 0.43
COPS3-207ENST00000477299 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 H0YGN5 161 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 USO1O60763 962 aaKnown RBP17.7■□□□□ 0.42
COPS3-207ENST00000477299 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
COPS3-207ENST00000477299 EYA4O95677 639 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 CHRNA1P02708 482 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 VTNP04004 478 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 CKBP12277 381 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 MCM6Q14566 821 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 BADQ92934 168 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 CALML4Q96GE6 196 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 SCAND2PQ9GZW5 306 aaPredicted RBP17.7■□□□□ 0.42
COPS3-207ENST00000477299 DHX33Q9H6R0 707 aaKnown RBP17.7■□□□□ 0.42
COPS3-207ENST00000477299 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
COPS3-207ENST00000477299 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 TIMP1P01033 207 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 SSBP05455 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
COPS3-207ENST00000477299 RAG1P15918 1043 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 MUTP22033 750 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 MDM2Q00987 491 aaPredicted RBP17.69■□□□□ 0.42
COPS3-207ENST00000477299 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 EMC2Q15006 297 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 PADI6Q6TGC4 694 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 DNM3Q9UQ16 869 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 STK24Q9Y6E0 443 aa17.69■□□□□ 0.42
COPS3-207ENST00000477299 MAGEB2O15479 319 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 POLGP54098 1239 aaPredicted RBP17.68■□□□□ 0.42
COPS3-207ENST00000477299 EPHB4P54760 987 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 E2F4Q16254 413 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 ARSHQ5FYA8 562 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 RINT1Q6NUQ1 792 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 RASSF8Q8NHQ8 419 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 STAMQ92783 540 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
COPS3-207ENST00000477299 ARHGEF35A5YM69 484 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 IQCF3P0C7M6 154 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 CSF2RAP15509 400 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
COPS3-207ENST00000477299 MGAT3Q09327 533 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 RRAGBQ5VZM2 374 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 TAF2Q6P1X5 1199 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 RAD54LQ92698 747 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 NT5C3AQ9H0P0 336 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 SUCLA2Q9P2R7 463 aaPredicted RBP17.67■□□□□ 0.42
COPS3-207ENST00000477299 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 CDY2AQ9Y6F7 541 aa17.67■□□□□ 0.42
COPS3-207ENST00000477299 POLR2DO15514 142 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 NBNO60934 754 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 GPR32O75388 356 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 ACRP10323 421 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 SELPP16109 830 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 PFKFB1P16118 471 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 CMA1P23946 247 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 NLRP11P59045 1033 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 RBL2Q08999 1139 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 KIZQ2M2Z5 673 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 MFSD5Q6N075 450 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 ASAP3Q8TDY4 903 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 BSNDQ8WZ55 320 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 DHX58Q96C10 678 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
COPS3-207ENST00000477299 CCDC39Q9UFE4 941 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 AKT3Q9Y243 479 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
COPS3-207ENST00000477299 SFI1A8K8P3 1242 aa17.65■□□□□ 0.42
COPS3-207ENST00000477299 RSPH10B2B2RC85 870 aa17.65■□□□□ 0.42
COPS3-207ENST00000477299 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
COPS3-207ENST00000477299 SLC26A4O43511 780 aa17.65■□□□□ 0.42
COPS3-207ENST00000477299 DGAT1O75907 488 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms