RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 USP18Q9UMW8 372 aa8.48□□□□□ -1.05
PRPF3-205ENST00000476970 SIT1Q9Y3P8 196 aa8.48□□□□□ -1.05
PRPF3-205ENST00000476970 PCDHGA2Q9Y5H1 932 aa8.48□□□□□ -1.05
PRPF3-205ENST00000476970 FRMPD4Q14CM0 1322 aa8.48□□□□□ -1.05
PRPF3-205ENST00000476970 TTC41PQ6P2S7 1318 aa8.48□□□□□ -1.05
PRPF3-205ENST00000476970 BAZ2BQ9UIF8 2168 aaKnown RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SMARCA5O60264 1052 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 RPS6KA5O75582 802 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SRFP11831 508 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 MARK3P27448 753 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 KRT76Q01546 638 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 TMEM62Q0P6H9 643 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 MARCH8Q5T0T0 291 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 FAM102BQ5T8I3 360 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 TSHZ3Q63HK5 1081 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 NLRX1Q86UT6 975 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 PPFIBP1Q86W92 1011 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 NME8Q8N427 588 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 C12orf76Q8N812 135 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 PANK1Q8TE04 598 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 ATRIPQ8WXE1 791 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 STAMQ92783 540 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 COL26A1Q96A83 441 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 CDHR1Q96JP9 859 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 ADAM2Q99965 735 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 TMX1Q9H3N1 280 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SMARCAD1Q9H4L7 1026 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 BCAS3Q9H6U6 928 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 VAT1LQ9HCJ6 419 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SCUBE2Q9NQ36 999 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 ARHGEF3Q9NR81 526 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 FBXO4Q9UKT5 387 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 ANGPTL2Q9UKU9 493 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 CA14Q9ULX7 337 aa8.47□□□□□ -1.05
PRPF3-205ENST00000476970 SMG5Q9UPR3 1016 aaKnown RBP8.47□□□□□ -1.05
PRPF3-205ENST00000476970 C9IYK1 514 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 ZBTB5O15062 677 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 GPR182O15218 404 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 LAMTOR5O43504 91 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 NARSO43776 548 aaKnown RBP8.46□□□□□ -1.06
PRPF3-205ENST00000476970 DCNP07585 359 aaKnown RBP8.46□□□□□ -1.06
PRPF3-205ENST00000476970 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 LETM2Q2VYF4 491 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 TMC5Q6UXY8 1006 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 C15orf39Q6ZRI6 1047 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 GPR149Q86SP6 731 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 SEPT1Q8WYJ6 367 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 DDX1Q92499 740 aaKnown RBP8.46□□□□□ -1.06
PRPF3-205ENST00000476970 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 SHDQ96IW2 340 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.06
PRPF3-205ENST00000476970 EPC1Q9H2F5 836 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 ZBTB40Q9NUA8 1239 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 DLGAP2Q9P1A6 1054 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
PRPF3-205ENST00000476970 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.06
PRPF3-205ENST00000476970 MYH15Q9Y2K3 1946 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 SMIM35A0A1B0GVV1 85 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 SLC30A4O14863 429 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 TBC1D4O60343 1298 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 MGEA5O60502 916 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 ARP10275 920 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 FGFR1P11362 822 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 INSRRP14616 1297 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 EPCAMP16422 314 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 GBP2P32456 591 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-205ENST00000476970 MAGEA9P43362 315 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 MRPS9P82933 396 aaKnown RBP8.45□□□□□ -1.06
PRPF3-205ENST00000476970 VPS53Q5VIR6 699 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 SLC39A11Q8N1S5 342 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 PJA1Q8NG27 643 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 KIF12Q96FN5 646 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 MRPL9Q9BYD2 267 aaKnown RBP8.45□□□□□ -1.06
PRPF3-205ENST00000476970 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 AZI2Q9H6S1 392 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 SPATA6Q9NWH7 488 aaPredicted RBP8.45□□□□□ -1.06
PRPF3-205ENST00000476970 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
PRPF3-205ENST00000476970 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 IRAK3Q9Y616 596 aa8.45□□□□□ -1.06
PRPF3-205ENST00000476970 CXCL14O95715 111 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 FGAP02671 866 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 PBX3P40426 434 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 ALDH7A1P49419 539 aaKnown RBP8.44□□□□□ -1.06
PRPF3-205ENST00000476970 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
PRPF3-205ENST00000476970 HAND2P61296 217 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
PRPF3-205ENST00000476970 PCNX4Q63HM2 1172 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 DCLRE1AQ6PJP8 1040 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 GPR152Q8TDT2 470 aa8.44□□□□□ -1.06
PRPF3-205ENST00000476970 RSPH1Q8WYR4 309 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms