RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 IKZF4Q9H2S9 585 aa25.34■■□□□ 1.65
CCDC7-206ENST00000476558 ST6GALNAC4Q9H4F1 302 aa25.34■■□□□ 1.65
CCDC7-206ENST00000476558 ARMCX3Q9UH62 379 aaPredicted RBP25.34■■□□□ 1.65
CCDC7-206ENST00000476558 DKC1O60832 514 aaKnown RBP eCLIP25.33■■□□□ 1.65
CCDC7-206ENST00000476558 ALCAMQ13740 583 aa25.33■■□□□ 1.65
CCDC7-206ENST00000476558 TSR1Q2NL82 804 aaKnown RBP25.33■■□□□ 1.65
CCDC7-206ENST00000476558 PLA2G4FQ68DD2 849 aa25.33■■□□□ 1.65
CCDC7-206ENST00000476558 SYT10Q6XYQ8 523 aa25.33■■□□□ 1.65
CCDC7-206ENST00000476558 ZNF397Q8NF99 534 aaPredicted RBP25.33■■□□□ 1.65
CCDC7-206ENST00000476558 SH2D3AQ9BRG2 576 aa25.33■■□□□ 1.65
CCDC7-206ENST00000476558 METTL14Q9HCE5 456 aaKnown RBP25.33■■□□□ 1.65
CCDC7-206ENST00000476558 FAM207AQ9NSI2 230 aaPredicted RBP25.33■■□□□ 1.65
CCDC7-206ENST00000476558 ARID2Q68CP9 1835 aa25.33■■□□□ 1.65
CCDC7-206ENST00000476558 CLIC2O15247 247 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 CASP4P49662 377 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 KCNH2Q12809 1159 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 MAP1SQ66K74 1059 aaPredicted RBP25.33■■□□□ 1.64
CCDC7-206ENST00000476558 SWSAP1Q6NVH7 229 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 MAEAQ7L5Y9 396 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 CCDC60Q8IWA6 550 aaPredicted RBP25.33■■□□□ 1.64
CCDC7-206ENST00000476558 TMEM174Q8WUU8 243 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 DRC1Q96MC2 740 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 GBP3Q9H0R5 595 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 MMRN2Q9H8L6 949 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 PLAGL2Q9UPG8 496 aa25.33■■□□□ 1.64
CCDC7-206ENST00000476558 EPN1Q9Y6I3 576 aaPredicted RBP25.33■■□□□ 1.64
CCDC7-206ENST00000476558 OTUD6AQ7L8S5 288 aa25.32■■□□□ 1.64
CCDC7-206ENST00000476558 BAP1Q92560 729 aa25.32■■□□□ 1.64
CCDC7-206ENST00000476558 AGPAT3Q9NRZ7 376 aa25.32■■□□□ 1.64
CCDC7-206ENST00000476558 CLEC11AQ9Y240 323 aa25.32■■□□□ 1.64
CCDC7-206ENST00000476558 PHLPP2Q6ZVD8 1323 aa25.32■■□□□ 1.64
CCDC7-206ENST00000476558 DNAJC25-GNG10A0A024R161 153 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 FANCGO15287 622 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 NOL4O94818 638 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 SUPT20HL2P0C7V6 817 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 SLC9A9Q8IVB4 645 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 FGD4Q96M96 766 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 CCDC43Q96MW1 224 aaKnown RBP25.31■■□□□ 1.64
CCDC7-206ENST00000476558 MKNK1Q9BUB5 465 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 PDLIM7Q9NR12 457 aa25.31■■□□□ 1.64
CCDC7-206ENST00000476558 NDUFA10O95299 355 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 GTF2BQ00403 316 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 MIS18BP1Q6P0N0 1132 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 SEPT14Q6ZU15 432 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 HS2ST1Q7LGA3 356 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 ACRBPQ8NEB7 543 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 GOLGA5Q8TBA6 731 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 SYNGAP1Q96PV0 1343 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 IGSF9BQ9UPX0 1349 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 K7ENM7 598 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 SOCS7O14512 581 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 EPB41P11171 864 aaKnown RBP25.3■■□□□ 1.64
CCDC7-206ENST00000476558 MYBPC2Q14324 1141 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 CYFIP1Q7L576 1253 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 NEK11Q8NG66 645 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 GPRC5CQ9NQ84 441 aa25.3■■□□□ 1.64
CCDC7-206ENST00000476558 ZNHIT6Q9NWK9 470 aaKnown RBP25.3■■□□□ 1.64
CCDC7-206ENST00000476558 REXO2Q9Y3B8 237 aaKnown RBP25.3■■□□□ 1.64
CCDC7-206ENST00000476558 IGKV6D-21A0A0A0MT36 114 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 A0A0U1RQJ8 604 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 NCKAP1LP55160 1127 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 DPY19L2P1Q6NXN4 242 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 ATRIPQ8WXE1 791 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 SLC35C1Q96A29 364 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 MS4A4AQ96JQ5 239 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 MROH8Q9H579 483 aa25.29■■□□□ 1.64
CCDC7-206ENST00000476558 MAFBQ9Y5Q3 323 aaPredicted RBP25.29■■□□□ 1.64
CCDC7-206ENST00000476558 MYH9P35579 1960 aaKnown RBP25.29■■□□□ 1.64
CCDC7-206ENST00000476558 TGFB3P10600 412 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 XRCC5P13010 732 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 PSMC2P35998 433 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 CCDC170Q8IYT3 715 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 SLC17A8Q8NDX2 589 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 TMEM206Q9H813 350 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 CEP72Q9P209 647 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 AFPP02771 609 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 UBA1P22314 1058 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 PRKCEQ02156 737 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 TRMT1LQ7Z2T5 733 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 HAUS6Q7Z4H7 955 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 SHCBP1Q8NEM2 672 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 CEP170P1Q96L14 293 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 NTPCRQ9BSD7 190 aaKnown RBP25.28■■□□□ 1.64
CCDC7-206ENST00000476558 DNAI1Q9UI46 699 aa25.28■■□□□ 1.64
CCDC7-206ENST00000476558 ZNFX1Q9P2E3 1918 aaKnown RBP25.27■■□□□ 1.64
CCDC7-206ENST00000476558 CTIFO43310 598 aaKnown RBP25.27■■□□□ 1.64
CCDC7-206ENST00000476558 ATP4AP20648 1035 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 ERVK-9P63128 1117 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 FKBP1BP68106 108 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 SP4Q02446 784 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 PDXDC1Q6P996 788 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 C12orf56Q8IXR9 622 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 ACCSQ96QU6 501 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 L2HGDHQ9H9P8 463 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 NHEJ1Q9H9Q4 299 aaPredicted RBP25.27■■□□□ 1.64
CCDC7-206ENST00000476558 C17orf75Q9HAS0 396 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 CGNQ9P2M7 1197 aaKnown RBP25.27■■□□□ 1.64
CCDC7-206ENST00000476558 SLC45A1Q9Y2W3 748 aa25.27■■□□□ 1.64
CCDC7-206ENST00000476558 DYNC1I1O14576 645 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms