RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 MAGOHBQ96A72 148 aaKnown RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 ACTR5Q9H9F9 607 aaPredicted RBP9.13□□□□□ -0.95
VAPB-205ENST00000476395 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 SIX2Q9NPC8 291 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 MTMR4Q9NYA4 1195 aa9.13□□□□□ -0.95
VAPB-205ENST00000476395 PPIP5K2O43314 1243 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 AKR1B1P15121 316 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SLC8A1P32418 973 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 CPLX4Q7Z7G2 160 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SYN2Q92777 582 aaPredicted RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 MMRN2Q9H8L6 949 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 ABCF3Q9NUQ8 709 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 AIPL1Q9NZN9 384 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SPDYE5A6NIY4 337 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SHBGP04278 402 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 RPS6KA3P51812 740 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 CACNB1Q02641 598 aaPredicted RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 GRAPQ13588 217 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 WDR66Q8TBY9 1149 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 GRAPLQ8TC17 118 aaPredicted RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 CD209Q9NNX6 404 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 CEP72Q9P209 647 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 E9PMD0 336 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SH3BP5O60239 455 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 ACTN1P12814 892 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 TCP1P17987 556 aaKnown RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 DRD4P21917 467 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 MAGEA1P43355 309 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SLC12A3P55017 1021 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SLC8A3P57103 927 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 ENOX2Q16206 610 aaKnown RBP9.12□□□□□ -0.95
VAPB-205ENST00000476395 C1QTNF12Q5T7M4 302 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 IQCEQ6IPM2 695 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 SLC17A8Q8NDX2 589 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 IKZF4Q9H2S9 585 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 C6orf50Q9HD87 102 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 POLLQ9UGP5 575 aa9.12□□□□□ -0.95
VAPB-205ENST00000476395 COL11A2P13942 1736 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 TACC1O75410 805 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 PSMC6P62333 389 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 TBC1D25Q3MII6 688 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 CD302Q8IX05 232 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ADGRF4Q8IZF3 695 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ZNF444Q8N0Y2 327 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 LRRC47Q8N1G4 583 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 RNF10Q8N5U6 811 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 LENG9Q96B70 501 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 HOOK2Q96ED9 719 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 MBOAT7Q96N66 472 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 SETDB2Q96T68 719 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 EDEM3Q9BZQ6 932 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 KCNMB3Q9NPA1 279 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 RIC8AQ9NPQ8 531 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ZNHIT6Q9NWK9 470 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 STK38LQ9Y2H1 464 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ATP6V0A2Q9Y487 856 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 MED24O75448 989 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 GNA11P29992 359 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 RNASELQ05823 741 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 SLC18A3Q16572 532 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 MAGEC3Q8TD91 643 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 SCFD2Q8WU76 684 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 IQCDQ96DY2 449 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 CD2APQ9Y5K6 639 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 COL4A3BPQ9Y5P4 624 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 GCOM1H8Y6P7 765 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 TRIM37O94972 964 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 MYZAPP0CAP1 466 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 PECAM1P16284 738 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 CYP11B2P19099 503 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ABCD1P33897 745 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 CTNNA1P35221 906 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 RFC4P35249 363 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 PPP1R2P41236 205 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ALDH5A1P51649 535 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 PAK2Q13177 524 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 GLE1Q53GS7 698 aaKnown RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 ARHGAP27Q6ZUM4 889 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 IFT20Q8IY31 132 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 PROM2Q8N271 834 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 CERS5Q8N5B7 392 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 SNX29Q8TEQ0 813 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms