RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 CSF1RP07333 972 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 RASIP1Q5U651 963 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 DNAJC24Q6P3W2 148 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 LINC00116Q8NCU8 138 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 TECPR2O15040 1411 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 MT-ND3P03897 115 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 KRT1P04264 644 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 GPC5P78333 572 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 CTTNQ14247 550 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 CCNI2Q6ZMN8 369 aaPredicted RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 TBC1D1Q86TI0 1168 aaPredicted RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 ADPGKQ9BRR6 497 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 CNOT7Q9UIV1 285 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 PDIA5Q14554 519 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 RPAINQ86UA6 219 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 SLC44A5Q8NCS7 719 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 DCAF4Q8WV16 495 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 LRRC1Q9BTT6 524 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 IFT122Q9HBG6 1241 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 PPRC1Q5VV67 1664 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 CPS1P31327 1500 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM187AA6NFU0 413 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 FCER1AP12319 257 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 NLRP14Q86W24 1093 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 CEP95Q96GE4 821 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 ZHX2Q9Y6X8 837 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 PEX19P40855 299 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 TMEM179Q6ZVK1 233 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 RFX6Q8HWS3 928 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 KSR1Q8IVT5 923 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 PDCD7Q8N8D1 485 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 OPHN1O60890 802 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 HOXD10P28358 340 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 REXO1L1PQ8IX06 675 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 HPS5Q9UPZ3 1129 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM160B2Q86V87 743 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 NOP53Q9NZM5 478 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
HNRNPU-209ENST00000476241 SFI1A8K8P3 1242 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 PSMD14O00487 310 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 MCF2LO15068 1137 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 MAPK13O15264 365 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 GYPCP04921 128 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 GARSP41250 739 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 PITPNM3Q9BZ71 974 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 PDE1BQ01064 536 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 CAV1Q03135 178 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 TRIP13Q15645 432 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 SEL1LQ9UBV2 794 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 POTECB2RU33 542 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 CHRNA3P32297 505 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 CENPUQ71F23 418 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 PDIK1LQ8N165 341 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 GDAP1Q8TB36 358 aa17.34■□□□□ 0.37
HNRNPU-209ENST00000476241 IPO5O00410 1097 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 PPP1R37O75864 691 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 PMS2P54278 862 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 SH2D4BQ5SQS7 431 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM160B1Q5W0V3 765 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 SCINQ9Y6U3 715 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 HOXA13P31271 388 aaPredicted RBP17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 TAF11Q15544 211 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 MICALL2Q8IY33 904 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 STAG2Q8N3U4 1231 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 N4BP2L2Q92802 583 aaPredicted RBP17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 DDX23Q9BUQ8 820 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 TMEM260Q9NX78 707 aa17.33■□□□□ 0.37
HNRNPU-209ENST00000476241 FRMD3A2A2Y4 597 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L15C9J2P7 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L11C9JVI0 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L18D6R9N7 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L22D6RA61 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L19D6RCP7 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L20D6RJB6 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L24Q0WX57 530 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 NR1H3Q13133 447 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L6PQ6QN14 398 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 CCDC117Q8IWD4 279 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 NSMCE1Q8WV22 266 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 ZRANB2O95218 330 aaKnown RBP eCLIP17.33■□□□□ 0.363e-6■■■■■ 28.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms