RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 SYNE3Q6ZMZ3 975 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 TRAPPC12Q8WVT3 735 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 RGS18Q9NS28 235 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 FAM86C1Q9NVL1 165 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 LZTS1Q9Y250 596 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 FNDC1Q4ZHG4 1894 aaPredicted RBP12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 NFASCO94856 1347 aa12.61□□□□□ -0.39
EXOSC1-208ENST00000476234 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 NID2Q14112 1375 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 C9IYK1 514 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 EDIL3O43854 480 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 ATG7O95352 703 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 ARP10275 920 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 NAPAP54920 295 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 FOXK2Q01167 660 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 ANKRD54Q6NXT1 300 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 BLOC1S2Q6QNY1 142 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 FBXL16Q8N461 479 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 AZI2Q9H6S1 392 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 CWH43Q9H720 699 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 KCNH7Q9NS40 1196 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 C1orf112Q9NSG2 853 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 SLC9A2Q9UBY0 812 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 NOC2LQ9Y3T9 749 aaKnown RBP12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 ZFHX2Q9C0A1 2572 aaPredicted RBP12.6□□□□□ -0.39
EXOSC1-208ENST00000476234 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 SLC26A2P50443 739 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 STAT5BP51692 787 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 RCAN1P53805 252 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 ACTR2P61160 394 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 TMEM266Q2M3C6 531 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 FAM102BQ5T8I3 360 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 KIAA0319LQ8IZA0 1049 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 COLGALT1Q8NBJ5 622 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 TMEM40Q8WWA1 233 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 CRYGNQ8WXF5 182 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 ATOH1Q92858 354 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 PHKBQ93100 1093 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 MXRA8Q9BRK3 442 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 ELAC1Q9H777 363 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 NCOA5Q9HCD5 579 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 TYW1Q9NV66 732 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 HCSTQ9UBK5 93 aa12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-208ENST00000476234 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 TBKBP1A7MCY6 615 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 DTNBO60941 627 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 PDGFBP01127 241 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 PDIA3P30101 505 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 ADCY7P51828 1080 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 EVCP57679 992 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 DSC3Q14574 896 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 ADAM2Q99965 735 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 CDHR5Q9HBB8 845 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
EXOSC1-208ENST00000476234 COL1A2P08123 1366 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 HIDE1A8MVS5 230 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 FAM86B1E9PN63 330 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 H0Y858 1186 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 MEIS1O00470 390 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 FAM86B2P0C5J1 330 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 LAG3P18627 525 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 KLRC1P26715 233 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 SREBF1P36956 1147 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 NBL1P41271 181 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 TECP42680 631 aa12.57□□□□□ -0.4
EXOSC1-208ENST00000476234 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms