RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 ATRIPQ8WXE1 791 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 GNA14O95837 355 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 ALDH5A1P51649 535 aaPredicted RBP20.97■□□□□ 0.95
SYF2-204ENST00000476231 FKBP1BP68106 108 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 CNTN2Q02246 1040 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 KNOP1Q1ED39 458 aaKnown RBP20.97■□□□□ 0.95
SYF2-204ENST00000476231 TEX35Q5T0J7 233 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 PADI6Q6TGC4 694 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 MYCT1Q8N699 235 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 TRAF3IP3Q9Y228 551 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 PCDHA10Q9Y5I2 948 aa20.97■□□□□ 0.95
SYF2-204ENST00000476231 EIF3DO15371 548 aaKnown RBP eCLIP20.96■□□□□ 0.95
SYF2-204ENST00000476231 PNMA6AP0CW24 399 aaPredicted RBP20.96■□□□□ 0.95
SYF2-204ENST00000476231 ICAM3P32942 547 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 ZNF408Q9H9D4 720 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 RBPJLQ9UBG7 517 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 CCDC151A5D8V7 595 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 PDXKO00764 312 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 MYBP10242 640 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 ERCC3P19447 782 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 YWHABP31946 246 aaKnown RBP20.96■□□□□ 0.95
SYF2-204ENST00000476231 RARRES1P49788 294 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 PARD6BQ9BYG5 372 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 NDST4Q9H3R1 872 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 ANKEF1Q9NU02 776 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 AGPAT5Q9NUQ2 364 aa20.96■□□□□ 0.95
SYF2-204ENST00000476231 ASTN1O14525 1302 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 SFI1A8K8P3 1242 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 KRT86O43790 486 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 DKC1O60832 514 aaKnown RBP eCLIP20.95■□□□□ 0.94
SYF2-204ENST00000476231 IPO7O95373 1038 aaKnown RBP20.95■□□□□ 0.94
SYF2-204ENST00000476231 GCNT3O95395 438 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 AMPD2Q01433 879 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 UGCGQ16739 394 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 CC2D1AQ6P1N0 951 aaPredicted RBP20.95■□□□□ 0.94
SYF2-204ENST00000476231 STXBP4Q6ZWJ1 553 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 MSANTD4Q8NCY6 345 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
SYF2-204ENST00000476231 HNRNPLLQ8WVV9 542 aaKnown RBP20.95■□□□□ 0.94
SYF2-204ENST00000476231 TIPINQ9BVW5 301 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 JPH1Q9HDC5 661 aaPredicted RBP20.95■□□□□ 0.94
SYF2-204ENST00000476231 PNMA3Q9UL41 463 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 PLAGL2Q9UPG8 496 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 SIK3Q9Y2K2 1263 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 UBE4BO95155 1302 aa20.95■□□□□ 0.94
SYF2-204ENST00000476231 CALUO43852 315 aaPredicted RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 EDNRBP24530 442 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 MARSP56192 900 aaKnown RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 FAM133AQ8N9E0 248 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 CCDC43Q96MW1 224 aaKnown RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 TXNRD2Q9NNW7 524 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 SLC9A2Q9UBY0 812 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 RAB21Q9UL25 225 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 CETN3O15182 167 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 HIP1RO75146 1068 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 PRPF6O94906 941 aaKnown RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 HOXD13P35453 343 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 NHEJ1Q9H9Q4 299 aaPredicted RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 POLD4Q9HCU8 107 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 ARFGAP3Q9NP61 516 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 TYW1Q9NV66 732 aaKnown RBP20.94■□□□□ 0.94
SYF2-204ENST00000476231 MYO6Q9UM54 1294 aa20.94■□□□□ 0.94
SYF2-204ENST00000476231 SOWAHBA6NEL2 793 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 PSAPP07602 524 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 MAPK7Q13164 816 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 ADAM9Q13443 819 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 CCDC40Q4G0X9 1142 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 FAM178BQ8IXR5 827 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 ATP6V0A1Q93050 837 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 PCMTD1Q96MG8 357 aaPredicted RBP20.93■□□□□ 0.94
SYF2-204ENST00000476231 TSGA10Q9BZW7 698 aa20.93■□□□□ 0.94
SYF2-204ENST00000476231 ODR4Q5SWX8 454 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 ZNF720Q7Z2F6 126 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 FIZ1Q96SL8 496 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
SYF2-204ENST00000476231 MROH8Q9H579 483 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 BCAS3Q9H6U6 928 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 RRAGCQ9HB90 399 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 SLC45A1Q9Y2W3 748 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CTAGE15A4D2H0 777 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 LCA5LO95447 670 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 ABL1P00519 1130 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CTAGE8P0CG41 777 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CETPP11597 493 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 Q3C1V9 767 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CCDC122Q5T0U0 273 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 PAPD7Q5XG87 772 aaKnown RBP20.92■□□□□ 0.94
SYF2-204ENST00000476231 TRAPPC11Q7Z392 1133 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CTAGE6Q86UF2 777 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 CTAGE4Q8IX94 777 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 DAW1Q8N136 415 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 ZMYND15Q9H091 742 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 GBA2Q9HCG7 927 aaPredicted RBP20.92■□□□□ 0.94
SYF2-204ENST00000476231 LARSQ9P2J5 1176 aaKnown RBP20.92■□□□□ 0.94
SYF2-204ENST00000476231 GUCA1BQ9UMX6 200 aa20.92■□□□□ 0.94
SYF2-204ENST00000476231 ANO9A1A5B4 782 aa20.91■□□□□ 0.94
SYF2-204ENST00000476231 NKRFO15226 690 aaKnown RBP eCLIP20.91■□□□□ 0.94
SYF2-204ENST00000476231 MAPTP10636 758 aaKnown RBP20.91■□□□□ 0.94
SYF2-204ENST00000476231 NR2F2P24468 414 aa20.91■□□□□ 0.94
SYF2-204ENST00000476231 RPL13P26373 211 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms