RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DDX46Q7L014 1031 aaKnown RBP9.1□□□□□ -0.95
SMC5-203ENST00000475540 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 PHYKPLQ8IUZ5 450 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 PTPN22Q9Y2R2 807 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 SLC4A7Q9Y6M7 1214 aa9.1□□□□□ -0.95
SMC5-203ENST00000475540 NPEPPSL1A6NEC2 478 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 MAFO75444 373 aaPredicted RBP9.09□□□□□ -0.95
SMC5-203ENST00000475540 ITGB3P05106 788 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 CD40P25942 277 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 MEOX1P50221 254 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 EPHB4P54760 987 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 ESRP1Q6NXG1 681 aaKnown RBP9.09□□□□□ -0.95
SMC5-203ENST00000475540 RTKN2Q8IZC4 609 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 C7orf31Q8N865 590 aa9.09□□□□□ -0.95
SMC5-203ENST00000475540 B8ZZF3 427 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 FKBP9O95302 570 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 LSSP48449 732 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 SMAD3P84022 425 aaKnown RBP9.08□□□□□ -0.96
SMC5-203ENST00000475540 LRRC32Q14392 662 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 SLFN13Q68D06 897 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 TRIM68Q6AZZ1 485 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 FKBP9P1Q75LS8 142 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 THNSL2Q86YJ6 484 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 RTF1Q92541 710 aaKnown RBP9.08□□□□□ -0.96
SMC5-203ENST00000475540 RPGRQ92834 1020 aaKnown RBP9.08□□□□□ -0.96
SMC5-203ENST00000475540 USP7Q93009 1102 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 CAAP1Q9H8G2 361 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 SEC61A2Q9H9S3 476 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 SPTLC3Q9NUV7 552 aa9.08□□□□□ -0.96
SMC5-203ENST00000475540 CNOT11Q9UKZ1 510 aaKnown RBP9.08□□□□□ -0.96
SMC5-203ENST00000475540 K7ESM1 405 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 MAFGO15525 162 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 TGM5O43548 720 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 MASP1P48740 699 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 BCAR1P56945 870 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 RBM15Q96T37 977 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMC5-203ENST00000475540 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 PPP4R1LQ9P1A2 415 aa9.07□□□□□ -0.96
SMC5-203ENST00000475540 APOL3O95236 402 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 CNOT4O95628 575 aaKnown RBP9.06□□□□□ -0.96
SMC5-203ENST00000475540 LSP1P33241 339 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 SOX5P35711 763 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 ADCYAP1R1P41586 468 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 ADCY2Q08462 1091 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC5-203ENST00000475540 PCOLCEQ15113 449 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 DHCR24Q15392 516 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 EGFLAMQ63HQ2 1017 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 LARP4Q71RC2 724 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC5-203ENST00000475540 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 FILIP1Q7Z7B0 1213 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 RNF180Q86T96 592 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 CHAC2Q8WUX2 184 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 KCMF1Q9P0J7 381 aa9.06□□□□□ -0.96
SMC5-203ENST00000475540 SAE1Q9UBE0 346 aaPredicted RBP9.06□□□□□ -0.96
SMC5-203ENST00000475540 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
SMC5-203ENST00000475540 STAT3P40763 770 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 STAT5BP51692 787 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 DGKDQ16760 1214 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 ZNF827Q17R98 1081 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 CT47A1Q5JQC4 288 aaPredicted RBP9.05□□□□□ -0.96
SMC5-203ENST00000475540 GPR158Q5T848 1215 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 USP30Q70CQ3 517 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 UBR7Q8N806 425 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 LMF1Q96S06 567 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 USP36Q9P275 1121 aaKnown RBP9.05□□□□□ -0.96
SMC5-203ENST00000475540 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 NR2E1Q9Y466 385 aa9.05□□□□□ -0.96
SMC5-203ENST00000475540 PRRG2O14669 202 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 MRE11P49959 708 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 RAC3P60763 192 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 PHC1P78364 1004 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 MYBPC3Q14896 1274 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 ZNF610Q8N9Z0 462 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 TTC1Q99614 292 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 PTPN18Q99952 460 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 MYL10Q9BUA6 226 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 POFUT1Q9H488 388 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 IFT22Q9H7X7 185 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 MAGEL2Q9UJ55 1249 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 VWA7Q9Y334 891 aa9.04□□□□□ -0.96
SMC5-203ENST00000475540 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 ZEB2O60315 1214 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 SESN2P58004 480 aaPredicted RBP9.03□□□□□ -0.96
SMC5-203ENST00000475540 STRN3Q13033 797 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 ATP13A4Q4VNC1 1196 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 AGBL4Q5VU57 503 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 ESPNLQ6ZVH7 1005 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 CIR1Q86X95 450 aaPredicted RBP9.03□□□□□ -0.96
SMC5-203ENST00000475540 NEIL1Q96FI4 390 aaPredicted RBP9.03□□□□□ -0.96
SMC5-203ENST00000475540 LOXL4Q96JB6 756 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 OR10A2Q9H208 303 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 EMC7Q9NPA0 242 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
SMC5-203ENST00000475540 PRKAB1Q9Y478 270 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms