RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 MRPS27Q92552 414 aaKnown RBP23.27■■□□□ 1.32
VPS36-203ENST00000475375 ATOH1Q92858 354 aaPredicted RBP23.27■■□□□ 1.32
VPS36-203ENST00000475375 SNX27Q96L92 541 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 CWH43Q9H720 699 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 LZTS1Q9Y250 596 aa23.27■■□□□ 1.32
VPS36-203ENST00000475375 FNDC1Q4ZHG4 1894 aaPredicted RBP23.26■■□□□ 1.31
VPS36-203ENST00000475375 CFAP54Q96N23 3096 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 VTNP04004 478 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 TYW1BQ6NUM6 668 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 ABI1Q8IZP0 508 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 S1PR5Q9H228 398 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
VPS36-203ENST00000475375 SMCO2A6NFE2 343 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 SREBF1P36956 1147 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 TMEM184AQ6ZMB5 413 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 PLA2G4DQ86XP0 818 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 TMEM117Q9H0C3 514 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 IRF2BPLQ9H1B7 796 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 ELAC1Q9H777 363 aaKnown RBP23.25■■□□□ 1.31
VPS36-203ENST00000475375 NGRNQ9NPE2 291 aaKnown RBP23.25■■□□□ 1.31
VPS36-203ENST00000475375 RBM28Q9NW13 759 aaKnown RBP23.25■■□□□ 1.31
VPS36-203ENST00000475375 TCEAL9Q9UHQ7 104 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 KMT2EQ8IZD2 1858 aa23.25■■□□□ 1.31
VPS36-203ENST00000475375 ZFHX2Q9C0A1 2572 aaPredicted RBP23.25■■□□□ 1.31
VPS36-203ENST00000475375 HIDE1A8MVS5 230 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 HOXA2O43364 376 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 C22orf31O95567 290 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 PBX3P40426 434 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 FAM189BP81408 668 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 PLCB3Q01970 1234 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 KRT17Q04695 432 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 AP3B2Q13367 1082 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 CREB3L3Q68CJ9 461 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 SYCE2Q6PIF2 218 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 KCNT2Q6UVM3 1135 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 TMC7Q7Z402 723 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 RNF169Q8NCN4 708 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 ZNF558Q96NG5 402 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 LSG1Q9H089 658 aaKnown RBP23.24■■□□□ 1.31
VPS36-203ENST00000475375 NR2E1Q9Y466 385 aa23.24■■□□□ 1.31
VPS36-203ENST00000475375 V9GY48 417 aaPredicted RBP23.24■■□□□ 1.31
VPS36-203ENST00000475375 ZBTB42B2RXF5 422 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 HOXB8P17481 243 aaPredicted RBP23.23■■□□□ 1.31
VPS36-203ENST00000475375 CA8P35219 290 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 PPM1AP35813 382 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 NIPA1Q7RTP0 329 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 SGMS1Q86VZ5 419 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 TEX2Q8IWB9 1127 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 LRRC43Q8N309 656 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 RASGRP4Q8TDF6 673 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 CACNA1HO95180 2353 aa23.23■■□□□ 1.31
VPS36-203ENST00000475375 IPO5O00410 1097 aaKnown RBP23.22■■□□□ 1.31
VPS36-203ENST00000475375 PDGFBP01127 241 aaPredicted RBP23.22■■□□□ 1.31
VPS36-203ENST00000475375 ZSCAN20P17040 1043 aaPredicted RBP23.22■■□□□ 1.31
VPS36-203ENST00000475375 KCNC3Q14003 757 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 RTN1Q16799 776 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 APOA5Q6Q788 366 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 KREMEN2Q8NCW0 462 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 BBXQ8WY36 941 aaPredicted RBP23.22■■□□□ 1.31
VPS36-203ENST00000475375 CASP10Q92851 521 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 CASD1Q96PB1 797 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 GLT8D2Q9H1C3 349 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 SPG21Q9NZD8 308 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 AKT3Q9Y243 479 aa23.22■■□□□ 1.31
VPS36-203ENST00000475375 EVPLQ92817 2033 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 FAM86B1E9PN63 330 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 H0Y858 1186 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 hCG_1984214I3L0E3 225 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 GPR32O75388 356 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 FAM86B2P0C5J1 330 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 ATP4AP20648 1035 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 CLCN3P51790 818 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 DSC3Q14574 896 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 JAKMIP3Q5VZ66 844 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 CES5AQ6NT32 575 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 LRRC55Q6ZSA7 311 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 ZNF713Q8N859 430 aaPredicted RBP23.21■■□□□ 1.31
VPS36-203ENST00000475375 RIPOR3Q96MK2 946 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 MAP7D2Q96T17 732 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 ZNF577Q9BSK1 485 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 BARHL2Q9NY43 387 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 CDH22Q9UJ99 828 aa23.21■■□□□ 1.31
VPS36-203ENST00000475375 DHX15O43143 795 aaKnown RBP23.2■■□□□ 1.3
VPS36-203ENST00000475375 ZBTB43O43298 467 aa23.2■■□□□ 1.3
VPS36-203ENST00000475375 SCLT1Q96NL6 688 aa23.2■■□□□ 1.3
VPS36-203ENST00000475375 ANO2Q9NQ90 1003 aa23.2■■□□□ 1.3
VPS36-203ENST00000475375 CEP131Q9UPN4 1083 aa23.2■■□□□ 1.3
VPS36-203ENST00000475375 PSAPP07602 524 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 CLK2P49760 499 aaKnown RBP23.19■■□□□ 1.3
VPS36-203ENST00000475375 NLRP11P59045 1033 aaKnown RBP23.19■■□□□ 1.3
VPS36-203ENST00000475375 MTMR3Q13615 1198 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 SMC1AQ14683 1233 aaKnown RBP23.19■■□□□ 1.3
VPS36-203ENST00000475375 ZNF668Q96K58 619 aaPredicted RBP23.19■■□□□ 1.3
VPS36-203ENST00000475375 ESYT1Q9BSJ8 1104 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 TBC1D22BQ9NU19 505 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 RNF19AQ9NV58 838 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 SAMM50Q9Y512 469 aa23.19■■□□□ 1.3
VPS36-203ENST00000475375 MAFBQ9Y5Q3 323 aaPredicted RBP23.19■■□□□ 1.3
VPS36-203ENST00000475375 GOLGA8AA7E2F4 631 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms