RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 CDSNQ15517 529 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 CDCA2Q69YH5 1023 aaPredicted RBP6.79□□□□□ -1.32
LTN1-204ENST00000475344 RTN4RL1Q86UN2 441 aaPredicted RBP6.79□□□□□ -1.32
LTN1-204ENST00000475344 KIAA1958Q8N8K9 716 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
LTN1-204ENST00000475344 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 CD2APQ9Y5K6 639 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 UBA6A0AVT1 1052 aaPredicted RBP6.78□□□□□ -1.32
LTN1-204ENST00000475344 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 PRAMEF9Q5VWM5 478 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 TRIM68Q6AZZ1 485 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
LTN1-204ENST00000475344 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 ACSS2Q9NR19 701 aa6.78□□□□□ -1.32
LTN1-204ENST00000475344 C1QTNF3-AMACRE9PGA6 284 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 MATN2O00339 956 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 PRLP01236 227 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 SLC9A1P19634 815 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 COMTP21964 271 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 FNTBP49356 437 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 NEK4P51957 841 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 ROM1Q03395 351 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 ADAM15Q13444 863 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 TCEA2Q15560 299 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 HOMER1Q86YM7 354 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 TUBGCP5Q96RT8 1024 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 FOXB1Q99853 325 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
LTN1-204ENST00000475344 CBX4O00257 560 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 KPNA6O60684 536 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 PTX3P26022 381 aaPredicted RBP6.76□□□□□ -1.33
LTN1-204ENST00000475344 ZXDAP98168 799 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 NFYCQ13952 458 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 TTC38Q5R3I4 469 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 SLFN12LQ6IEE8 588 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 CNNM4Q6P4Q7 775 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 SEMA4AQ9H3S1 761 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 MAGEC2Q9UBF1 373 aaPredicted RBP6.76□□□□□ -1.33
LTN1-204ENST00000475344 ZKSCAN5Q9Y2L8 839 aa6.76□□□□□ -1.33
LTN1-204ENST00000475344 RFPL3O75679 317 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 RAD17O75943 681 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 APOL3O95236 402 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 STAT3P40763 770 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 R3HDM1Q15032 1099 aaKnown RBP6.75□□□□□ -1.33
LTN1-204ENST00000475344 PRKD1Q15139 912 aaPredicted RBP6.75□□□□□ -1.33
LTN1-204ENST00000475344 CFHR4Q92496 578 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 APPBP2Q92624 585 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 TMEM176AQ96HP8 235 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 MAML3Q96JK9 1138 aa6.75□□□□□ -1.33
LTN1-204ENST00000475344 SAE1Q9UBE0 346 aaPredicted RBP6.75□□□□□ -1.33
LTN1-204ENST00000475344 GAS7O60861 476 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 FSHBP01225 129 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 AMHP03971 560 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 CYP17A1P05093 508 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 ACO1P21399 889 aaKnown RBP6.74□□□□□ -1.33
LTN1-204ENST00000475344 ACAP1Q15027 740 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 TKFCQ3LXA3 575 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 POLNQ7Z5Q5 900 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 BCL6BQ8N143 479 aaPredicted RBP6.74□□□□□ -1.33
LTN1-204ENST00000475344 NXPE1Q8N323 547 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 ELF4Q99607 663 aaPredicted RBP6.74□□□□□ -1.33
LTN1-204ENST00000475344 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
LTN1-204ENST00000475344 H2AFY2Q9P0M6 372 aaPredicted RBP6.74□□□□□ -1.33
LTN1-204ENST00000475344 C6P13671 934 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 MSX2P35548 267 aaPredicted RBP6.73□□□□□ -1.33
LTN1-204ENST00000475344 RPS19P39019 145 aaKnown RBP6.73□□□□□ -1.33
LTN1-204ENST00000475344 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 C16orf86Q6ZW13 317 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
LTN1-204ENST00000475344 SHCBP1Q8NEM2 672 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 VPS11Q9H270 941 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 IFT57Q9NWB7 429 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 DENND2AQ9ULE3 1009 aa6.73□□□□□ -1.33
LTN1-204ENST00000475344 MRPL42Q9Y6G3 142 aaKnown RBP6.73□□□□□ -1.33
LTN1-204ENST00000475344 ZNF891A8MT65 544 aaPredicted RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 H2AFYO75367 372 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 ANTXR2P58335 489 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 DGKDQ16760 1214 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 ESRP1Q6NXG1 681 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 GPR135Q8IZ08 494 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 RTF1Q92541 710 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 RPGRQ92834 1020 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 GCDHQ92947 438 aaPredicted RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 RPL10LQ96L21 214 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 INTS7Q9NVH2 962 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 OXSMQ9NWU1 459 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 TESMINQ9Y4I5 508 aa6.72□□□□□ -1.33
LTN1-204ENST00000475344 RBM8AQ9Y5S9 174 aaKnown RBP6.72□□□□□ -1.33
LTN1-204ENST00000475344 SLC30A1Q9Y6M5 507 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms