RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CHMP4BP1P59074 171 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 NUCB2P80303 420 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 PRKCEQ02156 737 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 CYP4A11Q02928 519 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 TCF15Q12870 199 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 CTTNQ14247 550 aaKnown RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 PDIA5Q14554 519 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 TARBP2Q15633 366 aaKnown RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 SPECC1Q5M775 1068 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 PDXDC2PQ6P474 469 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 NFRKBQ6P4R8 1299 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 ANO5Q75V66 913 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 KCNK18Q7Z418 384 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 CATSPER3Q86XQ3 398 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 ATP8B4Q8TF62 1192 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 LEO1Q8WVC0 666 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 LMBR1Q8WVP7 490 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 DHX38Q92620 1227 aaKnown RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 DYDC2Q96IM9 177 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 EPSTI1Q96J88 318 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 PNMA5Q96PV4 448 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 SH2D3AQ9BRG2 576 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 LXNQ9BS40 222 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 ERAP1Q9NZ08 941 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 SAMM50Q9Y512 469 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 SRPRBQ9Y5M8 271 aaKnown RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 CHD7Q9P2D1 2997 aa7.84□□□□□ -1.15
LIMD1-204ENST00000474665 ZFHX2Q9C0A1 2572 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-204ENST00000474665 BAHCC1Q9P281 2608 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 SIP14410 1827 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 A0A087X0B3 334 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 MED19A0JLT2 244 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 MBLAC1A4D2B0 266 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 SPTLC2O15270 562 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TREHO43280 583 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 MARCH6O60337 910 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 LYPLA2O95372 231 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 YEATS4O95619 227 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 BMP15O95972 392 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 P4HBP07237 508 aaKnown RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 RPA1P27694 616 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 QARSP47897 775 aaKnown RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 NPEPPSP55786 919 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 PSMC5P62195 406 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 GRB10Q13322 594 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 MKRN4PQ13434 485 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 GRIK4Q16099 956 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TRIM71Q2Q1W2 868 aaKnown RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 PLA2G4FQ68DD2 849 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 ATL3Q6DD88 541 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TRAF7Q6Q0C0 670 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 POTEGQ6S5H5 508 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 RUFY4Q6ZNE9 571 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TRMT1LQ7Z2T5 733 aaKnown RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TPH2Q8IWU9 490 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 C4orf19Q8IY42 314 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 VWCEQ96DN2 955 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 ZNF396Q96N95 335 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TOX2Q96NM4 488 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 POLR3CQ9BUI4 534 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 NIFKQ9BYG3 293 aaKnown RBP7.83□□□□□ -1.16
LIMD1-204ENST00000474665 OSBPL7Q9BZF2 842 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 CSRNP2Q9H175 543 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 AZI2Q9H6S1 392 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 GDPD2Q9HCC8 539 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 LRWD1Q9UFC0 647 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 TBX21Q9UL17 535 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 PCDHA7Q9UN72 937 aa7.83□□□□□ -1.16
LIMD1-204ENST00000474665 UMODL1Q5DID0 1318 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 DCDC2CA8MYV0 355 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 PPP6R2O75170 966 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 C22orf31O95567 290 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 OATP04181 439 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 CYP2C9P11712 490 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 SLC26A2P50443 739 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 PTPN11Q06124 597 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 PPFIA1Q13136 1202 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 DRP2Q13474 957 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 GPNMBQ14956 572 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 STK38Q15208 465 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM119Q4V9L6 283 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 XKR3Q5GH77 459 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 FAM47CQ5HY64 1035 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 HYIQ5T013 277 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 FAM160B1Q5W0V3 765 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 PSRC1Q6PGN9 363 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 SHC4Q6S5L8 630 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 OTOP2Q7RTS6 562 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 SERINC5Q86VE9 423 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 LINC01465Q8N7H1 131 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 C7orf31Q8N865 590 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 KRI1Q8N9T8 703 aaKnown RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 PIGOQ8TEQ8 1089 aa7.82□□□□□ -1.16
LIMD1-204ENST00000474665 BBXQ8WY36 941 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-204ENST00000474665 GBF1Q92538 1859 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms