RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 INCENPQ9NQS7 918 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 GALNT8Q9NY28 637 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 FTSJ1Q9UET6 329 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 MCM8Q9UJA3 840 aa4.63□□□□□ -1.67
ECHDC1-213ENST00000474240 SHROOM4Q9ULL8 1493 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 FAM83GA6ND36 823 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 KRT37O76014 449 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 ZNF28P17035 718 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 CD40P25942 277 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 CNGA1P29973 690 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 IL2P60568 153 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 PHC1P78364 1004 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 ROM1Q03395 351 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 LRRC32Q14392 662 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 PRAMEF18Q5VWM3 479 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 TMC5Q6UXY8 1006 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 REXO1L1PQ8IX06 675 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 RBM12BQ8IXT5 1001 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 SMC1BQ8NDV3 1235 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 ASB15Q8WXK1 588 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 GBP4Q96PP9 640 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 BRINP2Q9C0B6 783 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 DEF6Q9H4E7 631 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 OXSMQ9NWU1 459 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 BTBD7Q9P203 1132 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 ZFP69BQ9UJL9 534 aa4.62□□□□□ -1.67
ECHDC1-213ENST00000474240 UBA6A0AVT1 1052 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 H0Y858 1186 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 KCNK3O14649 394 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 MUSKO15146 869 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 GPR42O15529 346 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 B4GALT3O60512 393 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 ATP2A2P16615 1042 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 BPIP17213 487 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 LSP1P33241 339 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 SELENOPP49908 381 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 R3HDM1Q15032 1099 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 TTC38Q5R3I4 469 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 PRR31Q5SQ13 230 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 CATSPEREQ5SY80 951 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 TIGD7Q6NT04 549 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 PLEKHH3Q7Z736 793 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 PHYKPLQ8IUZ5 450 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 IFNL2Q8IZJ0 200 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 C7orf31Q8N865 590 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 BARX1Q9HBU1 254 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 KCND1Q9NSA2 647 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 CROTQ9UKG9 612 aa4.61□□□□□ -1.67
ECHDC1-213ENST00000474240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 NPEPPSL1A6NEC2 478 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 NPIPB8E9PQR5 432 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 GOLGA6L22H0YM25 854 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 FKBP9O95302 570 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 MMEP08473 750 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 IBSPP21815 317 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 APEX1P27695 318 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 ECE1P42892 770 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 BCAR1P56945 870 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 ALDH6A1Q02252 535 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 NFATC3Q12968 1075 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 HNRNPA0Q13151 305 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 PCBP1Q15365 356 aaKnown RBP eCLIP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 SEC23AQ15436 765 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 STILQ15468 1287 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 SEPT7Q16181 437 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 TRMT10BQ6PF06 316 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 FKBP9P1Q75LS8 142 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 FILIP1Q7Z7B0 1213 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 CIR1Q86X95 450 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 TXNDC5Q8NBS9 432 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 DNERQ8NFT8 737 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 RPGRQ92834 1020 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 C16orf92Q96LL3 132 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 TMEM168Q9H0V1 697 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 WNT8AQ9H1J5 351 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 OR10A5Q9H207 317 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 TOMM22Q9NS69 142 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 THG1LQ9NWX6 298 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 TCAF1Q9Y4C2 921 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 SBNO2Q9Y2G9 1366 aa4.6□□□□□ -1.67
ECHDC1-213ENST00000474240 ZNF891A8MT65 544 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 RAB11FIP3O75154 756 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 KNG1P01042 644 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 CYP1A1P04798 512 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 IL13P35225 146 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 SESN3P58005 492 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 SURF1Q15526 300 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 ATP13A4Q4VNC1 1196 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 CREB3L3Q68CJ9 461 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 KLHL36Q8N4N3 616 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 AFAP1L2Q8N4X5 818 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 ZNF610Q8N9Z0 462 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 CHTF18Q8WVB6 975 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 CHFRQ96EP1 664 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 MAML3Q96JK9 1138 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 LCORQ96JN0 433 aaPredicted RBP4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 ZSWIM3Q96MP5 696 aa4.59□□□□□ -1.67
ECHDC1-213ENST00000474240 YTHDC1Q96MU7 727 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms