RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IFIT1BQ5T764 474 aaKnown RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 ESRP1Q6NXG1 681 aaKnown RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 PAQR3Q6TCH7 311 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 C11orf96Q7Z7L8 435 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 CXorf67Q86X51 503 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 SMC5Q8IY18 1101 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 CALML6Q8TD86 181 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 RSAD2Q8WXG1 361 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 RTF1Q92541 710 aaKnown RBP5.43□□□□□ -1.54
BRCA1-212ENST00000473961 TEKT5Q96M29 485 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 C1orf112Q9NSG2 853 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 GPR160Q9UJ42 338 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 ZBTB21Q9ULJ3 1066 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 GPR45Q9Y5Y3 372 aa5.43□□□□□ -1.54
BRCA1-212ENST00000473961 LOC102724159A0A0B4J2E5 919 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 H2AFYO75367 372 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 C4BPAP04003 597 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 GDNFP39905 211 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 ROM1Q03395 351 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 GBX1Q14549 363 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 PWP2Q15269 919 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 RRP12Q5JTH9 1297 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 CATSPEREQ5SY80 951 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 AUTS2Q8WXX7 1259 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 RPGRQ92834 1020 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 TUBGCP5Q96RT8 1024 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 NGRNQ9NPE2 291 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 MAN1C1Q9NR34 630 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 ARHGAP28Q9P2N2 729 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 SAP30BPQ9UHR5 308 aaKnown RBP5.42□□□□□ -1.54
BRCA1-212ENST00000473961 PALD1Q9ULE6 856 aa5.42□□□□□ -1.54
BRCA1-212ENST00000473961 TCRBV5S2A0A599 114 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 PRPF3O43395 683 aaKnown RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 HPXP02790 462 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 IFIT2P09913 472 aaKnown RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 TRIM27P14373 513 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 PHKG2P15735 406 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 AGXTP21549 392 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 MANFP55145 182 aaKnown RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 SAFB2Q14151 953 aaKnown RBP eCLIP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 PDCD1Q15116 288 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 SKIDA1Q1XH10 827 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 OLFML2BQ68BL8 750 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 FSTL4Q6MZW2 842 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 MPZL3Q6UWV2 235 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 EPM2AIP1Q7L775 607 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 WDR48Q8TAF3 677 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 TGFBRAP1Q8WUH2 860 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 ERCC4Q92889 916 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 DDX11Q96FC9 970 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 LRGUKQ96M69 825 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 GBP4Q96PP9 640 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 MPHOSPH6Q99547 160 aaKnown RBP5.41□□□□□ -1.54
BRCA1-212ENST00000473961 FOXB1Q99853 325 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 PLCD4Q9BRC7 762 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 FAM204AQ9H8W3 233 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 EBF1Q9UH73 591 aa5.41□□□□□ -1.54
BRCA1-212ENST00000473961 SGSM2O43147 1006 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 APOL3O95236 402 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 MPOP05164 745 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 DBHP09172 617 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 MED14OSP0DP75 135 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 FAHP16930 419 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 LPOP22079 712 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 SPIDRQ14159 915 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 VPS72Q15906 364 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 ANO4Q32M45 955 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 TOR2AQ5JU69 321 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 GJC2Q5T442 439 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 PRAMEF9Q5VWM5 478 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 MBNL2Q5VZF2 373 aaKnown RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 CCDC62Q6P9F0 684 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 ATG14Q6ZNE5 492 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 NLRX1Q86UT6 975 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 ASB15Q8WXK1 588 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 MYLIPQ8WY64 445 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 ZNF496Q96IT1 587 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 SARGQ9BW04 601 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 RNF38Q9H0F5 515 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 QRSL1Q9H0R6 528 aaKnown RBP5.4□□□□□ -1.54
BRCA1-212ENST00000473961 TNFRSF12AQ9NP84 129 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 NUMBLQ9Y6R0 609 aa5.4□□□□□ -1.54
BRCA1-212ENST00000473961 FRMPD2Q68DX3 1309 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-212ENST00000473961 F8W031 263 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 GOLGA6L22H0YM25 854 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 NUAK1O60285 661 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHGA12O60330 932 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 CTNND1O60716 968 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ASGR2P07307 311 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 MMEP08473 750 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 TMEM253P0C7T8 217 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 AOAHP28039 575 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 AFMP43652 599 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 MTNR1BP49286 362 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 BCAR1P56945 870 aa5.39□□□□□ -1.55
BRCA1-212ENST00000473961 SRSF2Q01130 221 aaKnown RBP5.39□□□□□ -1.55
BRCA1-212ENST00000473961 ADCY2Q08462 1091 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms