RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 MCTP1Q6DN14 999 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 RIT2Q99578 217 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 TEKT3Q9BXF9 490 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 FTHL17Q9BXU8 183 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 PLXNA4Q9HCM2 1894 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 CHMP2AO43633 222 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 MARCH6O60337 910 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 PSAPP07602 524 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 LINC00271P0C7V0 271 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 BMP1P13497 986 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 KCNQ1P51787 676 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 BBXQ8WY36 941 aaPredicted RBP20.31■□□□□ 0.84
SNX4-204ENST00000473417 HLA-CQ95604 372 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 PADI3Q9ULW8 664 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 SAMM50Q9Y512 469 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 PCDHA10Q9Y5I2 948 aa20.31■□□□□ 0.84
SNX4-204ENST00000473417 H3BNC9 293 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 PSMD10O75832 226 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 C22orf31O95567 290 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNX4-204ENST00000473417 PAK2Q13177 524 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 TMEM192Q8IY95 271 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 KIAA0319LQ8IZA0 1049 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 FIBCD1Q8N539 461 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 ZNF689Q96CS4 500 aaPredicted RBP20.3■□□□□ 0.84
SNX4-204ENST00000473417 MRPL38Q96DV4 380 aaKnown RBP20.3■□□□□ 0.84
SNX4-204ENST00000473417 INTS4Q96HW7 963 aaKnown RBP20.3■□□□□ 0.84
SNX4-204ENST00000473417 UNC45AQ9H3U1 944 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 KCNMB3Q9NPA1 279 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 GABBR1Q9UBS5 961 aa20.3■□□□□ 0.84
SNX4-204ENST00000473417 WDR64B1ANS9 1081 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 MCM7P33993 719 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 RTN4RL1Q86UN2 441 aaPredicted RBP20.29■□□□□ 0.84
SNX4-204ENST00000473417 CKAP2LQ8IYA6 745 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 CRIPAKQ8N1N5 446 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 HAS1Q92839 578 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 FAM20AQ96MK3 541 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 DISC1Q9NRI5 854 aa20.29■□□□□ 0.84
SNX4-204ENST00000473417 ARID2Q68CP9 1835 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 C5orf67F2Z3F1 127 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 TBX3O15119 743 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 DGKIO75912 1065 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 GPM6BQ13491 265 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 ZNF174Q15697 407 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 MIER3Q7Z3K6 550 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 CLP1Q92989 425 aaKnown RBP20.28■□□□□ 0.84
SNX4-204ENST00000473417 FAM167AQ96KS9 214 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 NOL7Q9UMY1 257 aaKnown RBP20.28■□□□□ 0.84
SNX4-204ENST00000473417 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
SNX4-204ENST00000473417 ZNF862O60290 1169 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 NEMFO60524 1076 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 BAG4O95429 457 aaKnown RBP20.27■□□□□ 0.84
SNX4-204ENST00000473417 SFNP31947 248 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 CTNNB1P35222 781 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 CALCRLQ16602 461 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 PTPROQ16827 1216 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 TMEM266Q2M3C6 531 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 TTC38Q5R3I4 469 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 FAM43BQ6ZT52 329 aaPredicted RBP20.27■□□□□ 0.84
SNX4-204ENST00000473417 TRMT1LQ7Z2T5 733 aaKnown RBP20.27■□□□□ 0.84
SNX4-204ENST00000473417 NPAS4Q8IUM7 802 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 TMEM40Q8WWA1 233 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 TMX1Q9H3N1 280 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 CDHR5Q9HBB8 845 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 ERVK-5Q9HDB9 667 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 RWDD3Q9Y3V2 267 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 MYO7AQ13402 2215 aa20.27■□□□□ 0.84
SNX4-204ENST00000473417 VPS37CA5D8V6 355 aaPredicted RBP20.26■□□□□ 0.83
SNX4-204ENST00000473417 JAK3P52333 1124 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 BTG3Q14201 252 aaPredicted RBP20.26■□□□□ 0.83
SNX4-204ENST00000473417 NBR1Q14596 966 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 UGCGQ16739 394 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 TIGD5Q53EQ6 642 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 B3GNT9Q6UX72 402 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 SLFN12Q8IYM2 578 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
SNX4-204ENST00000473417 TMEM60Q9H2L4 133 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 UBE2ZQ9H832 354 aaPredicted RBP20.26■□□□□ 0.83
SNX4-204ENST00000473417 VAV3Q9UKW4 847 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 GINS2Q9Y248 185 aa20.26■□□□□ 0.83
SNX4-204ENST00000473417 NOC2LQ9Y3T9 749 aaKnown RBP20.26■□□□□ 0.83
SNX4-204ENST00000473417 EML1O00423 815 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 RPS6KA5O75582 802 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 OATP04181 439 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 RB1P06400 928 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 HSP90AA1P07900 732 aaKnown RBP20.25■□□□□ 0.83
SNX4-204ENST00000473417 PDCP20941 246 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 BMPR1AP36894 532 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 TRAPPC10P48553 1259 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
SNX4-204ENST00000473417 CRYBB1P53674 252 aaPredicted RBP20.25■□□□□ 0.83
SNX4-204ENST00000473417 PRKCEQ02156 737 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 CMTR2Q8IYT2 770 aaKnown RBP20.25■□□□□ 0.83
SNX4-204ENST00000473417 LINC01465Q8N7H1 131 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 RDM1Q8NG50 284 aa20.25■□□□□ 0.83
SNX4-204ENST00000473417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.24■□□□□ 0.83
SNX4-204ENST00000473417 MAGEB2O15479 319 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 MGEA5O60502 916 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms