RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TTLL1O95922 423 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 NR3C1P04150 777 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 RPL13P26373 211 aaKnown RBP15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 HOXD13P35453 343 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 STAT1P42224 750 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 PSMC6P62333 389 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 SLF2Q8IX21 1173 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 P3H4Q92791 437 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 TLCD1Q96CP7 247 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 TACO1Q9BSH4 297 aaKnown RBP15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 DNM3Q9UQ16 869 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 CLIC2O15247 247 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 SLC26A4O43511 780 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 NF2P35240 595 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 DR1Q01658 176 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 POU5F1Q01860 360 aaKnown RBP15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 MFSD14BQ5SR56 506 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 ATP8B4Q8TF62 1192 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 SELENOSQ9BQE4 189 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 KCNMB3Q9NPA1 279 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 NHSQ6T4R5 1651 aa15.47■□□□□ 0.07
NHLRC3-204ENST00000473371 PLIN4Q96Q06 1357 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 TLDC2A0PJX2 215 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 SPDYE3A6NKU9 549 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 ABCB4P21439 1286 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 ERMARDQ5T6L9 678 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 CATSPER3Q86XQ3 398 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 CCDC197Q8NCU1 140 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 SLC35G2Q8TBE7 412 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 SLC35C1Q96A29 364 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 MXD3Q9BW11 206 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 FAM129AQ9BZQ8 928 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 TYW1Q9NV66 732 aaKnown RBP15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 MCM8Q9UJA3 840 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 TPX2Q9ULW0 747 aaKnown RBP15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 DAAM1Q9Y4D1 1078 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 FAM170AA1A519 330 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 EVI5O60447 810 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 UFL1O94874 794 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 COPB2P35606 906 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 GLYCTKQ8IVS8 523 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 ERMNQ8TAM6 284 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 CCT6BQ92526 530 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 KDM4CQ9H3R0 1056 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 PPP1R9AQ9ULJ8 1098 aa15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
NHLRC3-204ENST00000473371 GNPATO15228 680 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 PTENP60484 403 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 EPM2AIP1Q7L775 607 aaPredicted RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 RFFLQ8WZ73 363 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 ANO3Q9BYT9 981 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 ARFGEF1Q9Y6D6 1849 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 F8W031 263 aaPredicted RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 GCNT3O95395 438 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SHBGP04278 402 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 CHN1P15882 459 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SPDYCQ5MJ68 293 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 WLSQ5T9L3 541 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 CENPTQ96BT3 561 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 ERP44Q9BS26 406 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 IGKV6D-41A0A0C4DH26 115 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SMIM23A6NLE4 172 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 DDX3YO15523 660 aaKnown RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 RAD21O60216 631 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 GHRP10912 638 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 LMNB1P20700 586 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 PMS2P54278 862 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 PLTPP55058 493 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 GPSM2P81274 684 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 XRCC4Q13426 336 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 DENND2CQ68D51 928 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 SYT2Q8N9I0 419 aaPredicted RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 NEK9Q8TD19 979 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 NAP1L3Q99457 506 aaPredicted RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 TXLNGYQ9BZA5 131 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 DIS3Q9Y2L1 958 aaKnown RBP15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 ASTN1O14525 1302 aa15.45■□□□□ 0.06
NHLRC3-204ENST00000473371 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 TRIM37O94972 964 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 MMEP08473 750 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 ZNF211Q13398 564 aaPredicted RBP15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 PPP2R5EQ16537 467 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 PRR16Q569H4 304 aa15.44■□□□□ 0.06
NHLRC3-204ENST00000473371 DUPD1Q68J44 220 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms