RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
ACTB-209ENST00000473257 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 CWH43Q9H720 699 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 RGS18Q9NS28 235 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 CFAP54Q96N23 3096 aa12.73□□□□□ -0.37
ACTB-209ENST00000473257 TMEM150BA6NC51 233 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 TMEM221A6NGB7 291 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 HIDE1A8MVS5 230 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 LOC730098B7Z3J9 87 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 M0R296 226 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 EDIL3O43854 480 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 ZNF862O60290 1169 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 COASYQ13057 564 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 AP3B2Q13367 1082 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 DSC3Q14574 896 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 PKN1Q16512 942 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 PFKFB3Q16875 520 aaPredicted RBP12.72□□□□□ -0.37
ACTB-209ENST00000473257 NAALADL2Q58DX5 795 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 ZNF484Q5JVG2 852 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 SLC24A5Q71RS6 500 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 NIPA1Q7RTP0 329 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 PRSS33Q8NF86 280 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 FEZF2Q8TBJ5 459 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 EDAQ92838 391 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 TLR9Q9NR96 1032 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
ACTB-209ENST00000473257 CHMP2AO43633 222 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 DTNBO60941 627 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 SLC26A2P50443 739 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.378e-18■□□□□ 9.9
ACTB-209ENST00000473257 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.37
ACTB-209ENST00000473257 NLRP11P59045 1033 aaKnown RBP12.71□□□□□ -0.37
ACTB-209ENST00000473257 DUSP6Q16828 381 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 LONRF3Q496Y0 759 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 RNF20Q5VTR2 975 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 TRIM67Q6ZTA4 783 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 Q6ZUG5 572 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
ACTB-209ENST00000473257 BRF1Q92994 677 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 PBXIP1Q96AQ6 731 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 LENG9Q96B70 501 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 CASD1Q96PB1 797 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 SH2D3AQ9BRG2 576 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 ADAMTS10Q9H324 1103 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.37
ACTB-209ENST00000473257 AKT3Q9Y243 479 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 SAMM50Q9Y512 469 aa12.71□□□□□ -0.37
ACTB-209ENST00000473257 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
ACTB-209ENST00000473257 COL1A2P08123 1366 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 FSCN2O14926 492 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 GPR182O15218 404 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
ACTB-209ENST00000473257 CYP3A4P08684 503 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 WEE2P0C1S8 567 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 TECP42680 631 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 FAM189BP81408 668 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 ZXDAP98168 799 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 FGD1P98174 961 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 DRP2Q13474 957 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 CLLU1OSQ5K130 101 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 EFCAB12Q6NXP0 572 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 REXO1Q8N1G1 1221 aaKnown RBP12.7□□□□□ -0.38
ACTB-209ENST00000473257 JAKMIP1Q96N16 626 aaKnown RBP12.7□□□□□ -0.38
ACTB-209ENST00000473257 TCF25Q9BQ70 676 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
ACTB-209ENST00000473257 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 TMEM161AQ9NX61 479 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 MYH9P35579 1960 aaKnown RBP12.7□□□□□ -0.38
ACTB-209ENST00000473257 VPS13AQ96RL7 3174 aa12.7□□□□□ -0.38
ACTB-209ENST00000473257 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 MSH4O15457 936 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
ACTB-209ENST00000473257 PSAPP07602 524 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 VCPP55072 806 aaKnown RBP12.69□□□□□ -0.38
ACTB-209ENST00000473257 PRKCEQ02156 737 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
ACTB-209ENST00000473257 LINC01465Q8N7H1 131 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
ACTB-209ENST00000473257 SUSD6Q92537 303 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 MFSD14AQ96MC6 490 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 PHF7Q9BWX1 381 aaPredicted RBP12.69□□□□□ -0.38
ACTB-209ENST00000473257 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 SMOC2Q9H3U7 446 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 ENTPD7Q9NQZ7 604 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 AAASQ9NRG9 546 aa12.69□□□□□ -0.38
ACTB-209ENST00000473257 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms