RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 IGSF22Q8N9C0 903 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 RETREG2Q8NC44 543 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.05
TPM3-216ENST00000473036 CDHR5Q9HBB8 845 aa14.71□□□□□ -0.05
TPM3-216ENST00000473036 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 PP2D1A8MPX8 630 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 RSPH10B2B2RC85 870 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 RSPH10BP0C881 870 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 GRIN1Q05586 938 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 MTERF2Q49AM1 385 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 XKR3Q5GH77 459 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 TAF2Q6P1X5 1199 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 OTOP2Q7RTS6 562 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 BRAPQ7Z569 592 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 CATSPER3Q86XQ3 398 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 C4orf19Q8IY42 314 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 LRRC71Q8N4P6 559 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 FAM167AQ96KS9 214 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 SEPT9Q9UHD8 586 aaPredicted RBP14.7□□□□□ -0.06
TPM3-216ENST00000473036 CLIC4Q9Y696 253 aa14.7□□□□□ -0.06
TPM3-216ENST00000473036 GBF1Q92538 1859 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 IGKV6-21A0A0C4DH24 114 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 POU3F3P20264 500 aaPredicted RBP14.69□□□□□ -0.06
TPM3-216ENST00000473036 CDC25AP30304 524 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 CLCN3P51790 818 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 ADGRE1Q14246 886 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 PTPAQ15257 358 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 FOXD4L5Q5VV16 416 aaPredicted RBP14.69□□□□□ -0.06
TPM3-216ENST00000473036 TPH2Q8IWU9 490 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 CCDC155Q8N6L0 562 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 FOXD4L4Q8WXT5 416 aaPredicted RBP14.69□□□□□ -0.06
TPM3-216ENST00000473036 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 MMTAG2Q9BU76 263 aaKnown RBP14.69□□□□□ -0.06
TPM3-216ENST00000473036 NRBP2Q9NSY0 501 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 ZDHHC9Q9Y397 364 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 PCDHA11Q9Y5I1 949 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 CDY2AQ9Y6F7 541 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 MICAL3Q7RTP6 2002 aa14.69□□□□□ -0.06
TPM3-216ENST00000473036 GRXCR1A8MXD5 290 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 CAND2O75155 1236 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 LYPLA2O95372 231 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 VTNP04004 478 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 IGFBP4P22692 258 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 YWHABP31946 246 aaKnown RBP14.68□□□□□ -0.06
TPM3-216ENST00000473036 RFC2P35250 354 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 PRPHP41219 470 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 MRPS6P82932 125 aaKnown RBP14.68□□□□□ -0.06
TPM3-216ENST00000473036 LPIN1Q14693 890 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 SF3A1Q15459 793 aaKnown RBP14.68□□□□□ -0.06
TPM3-216ENST00000473036 PLEKHG4Q58EX7 1191 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 EFCAB12Q6NXP0 572 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 TMEM40Q8WWA1 233 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 PPM1EQ8WY54 764 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 POLR3CQ9BUI4 534 aaPredicted RBP14.68□□□□□ -0.06
TPM3-216ENST00000473036 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 AGO3Q9H9G7 860 aaKnown RBP14.68□□□□□ -0.06
TPM3-216ENST00000473036 CYP26B1Q9NR63 512 aa14.68□□□□□ -0.06
TPM3-216ENST00000473036 GPR32O75388 356 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 MAFO75444 373 aaPredicted RBP14.67□□□□□ -0.06
TPM3-216ENST00000473036 PDIA5Q14554 519 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 FBXO47Q5MNV8 452 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 POTEGQ6S5H5 508 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 METTL13Q8N6R0 699 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 DBF4BQ8NFT6 615 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 LRRC15Q8TF66 581 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
TPM3-216ENST00000473036 CHAMP1Q96JM3 812 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 ZNF668Q96K58 619 aaPredicted RBP14.67□□□□□ -0.06
TPM3-216ENST00000473036 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 PPP1R16BQ96T49 567 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 CEP131Q9UPN4 1083 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 SLC4A7Q9Y6M7 1214 aa14.67□□□□□ -0.06
TPM3-216ENST00000473036 LAD1O00515 517 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 ZSCAN22P10073 491 aaPredicted RBP14.66□□□□□ -0.06
TPM3-216ENST00000473036 GHRP10912 638 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 BMP1P13497 986 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 RPA1P27694 616 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 DTHD1Q6ZMT9 781 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 KCNK18Q7Z418 384 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 TMCO2Q7Z6W1 182 aaPredicted RBP14.66□□□□□ -0.06
TPM3-216ENST00000473036 NEK9Q8TD19 979 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 CEP170P1Q96L14 293 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 NKX2-4Q9H2Z4 354 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 ADAMTS10Q9H324 1103 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 DHX33Q9H6R0 707 aaKnown RBP14.66□□□□□ -0.06
TPM3-216ENST00000473036 TUFT1Q9NNX1 390 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 XPNPEP1Q9NQW7 623 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 BMP2KQ9NSY1 1161 aaPredicted RBP14.66□□□□□ -0.06
TPM3-216ENST00000473036 LRWD1Q9UFC0 647 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 COG5Q9UP83 839 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 KDM3AQ9Y4C1 1321 aa14.66□□□□□ -0.06
TPM3-216ENST00000473036 VWA3AA6NCI4 1184 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 MAGEB2O15479 319 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 RARRES1P49788 294 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
TPM3-216ENST00000473036 TBC1D8BQ0IIM8 1120 aa14.65□□□□□ -0.06
TPM3-216ENST00000473036 KIZQ2M2Z5 673 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms