RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 EEF1GP26641 437 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 HSPA9P38646 679 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 TOB1P50616 345 aaPredicted RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 NTRK3Q16288 839 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 GKAP1Q5VSY0 366 aaPredicted RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 CCT6BQ92526 530 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 BADQ92934 168 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 HERC5Q9UII4 1024 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 ZBTB43O43298 467 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
APTX-216ENST00000472896 GDF11O95390 407 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 KRT14P02533 472 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 FESP07332 822 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 CNGA1P29973 690 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 CDC25AP30304 524 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 DNM2P50570 870 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 ZBED6P86452 979 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 SPA17Q15506 151 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 GJC2Q5T442 439 aaPredicted RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 APOA5Q6Q788 366 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 HDAC7Q8WUI4 952 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 PIK3R5Q8WYR1 880 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 LPAR1Q92633 364 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 CSRNP2Q9H175 543 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 NOP53Q9NZM5 478 aaKnown RBP11.03□□□□□ -0.64
APTX-216ENST00000472896 PI4KBQ9UBF8 816 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 FRMPD3Q5JV73 1810 aa11.03□□□□□ -0.64
APTX-216ENST00000472896 EYSQ5T1H1 3165 aa11.02□□□□□ -0.64
APTX-216ENST00000472896 MAST2Q6P0Q8 1798 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 SIPA1L1O43166 1804 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 LTBP2Q14767 1821 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 A0A1W2PQJ5 194 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 MPHOSPH10O00566 681 aaKnown RBP11.02□□□□□ -0.65
APTX-216ENST00000472896 IGHA2P01877 340 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 FGAP02671 866 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 ASNSP08243 561 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 RPSAP08865 295 aaKnown RBP11.02□□□□□ -0.65
APTX-216ENST00000472896 GRIN1Q05586 938 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 FIGNQ5HY92 759 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 RRAGBQ5VZM2 374 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 CACNA2D4Q7Z3S7 1137 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 SGMS1Q86VZ5 419 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 TEX9Q8N6V9 391 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 USP38Q8NB14 1042 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 NSMCE1Q8WV22 266 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 CENPTQ96BT3 561 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 CALR3Q96L12 384 aaKnown RBP11.02□□□□□ -0.65
APTX-216ENST00000472896 LACRTQ9GZZ8 138 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 SH2D4AQ9H788 454 aa11.02□□□□□ -0.65
APTX-216ENST00000472896 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
APTX-216ENST00000472896 PPANQ9NQ55 473 aaKnown RBP11.02□□□□□ -0.65
APTX-216ENST00000472896 FRMD3A2A2Y4 597 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 TRIM43BA6NCK2 446 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 GCOM1H8Y6P7 765 aaPredicted RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
APTX-216ENST00000472896 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 MYZAPP0CAP1 466 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 IFNAR1P17181 557 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 GSTO1P78417 241 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 SMAD3P84022 425 aaKnown RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 ZNF658Q5TYW1 1059 aaPredicted RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 MFN1Q8IWA4 741 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 DIS3L2Q8IYB7 885 aaKnown RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 CCDC63Q8NA47 563 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 NELFBQ8WX92 580 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 APPBP2Q92624 585 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 OSBP2Q969R2 916 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 TRIM43Q96BQ3 446 aaPredicted RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 LRRC45Q96CN5 670 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 NUCKS1Q9H1E3 243 aaKnown RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 CNOT10Q9H9A5 744 aaKnown RBP11.01□□□□□ -0.65
APTX-216ENST00000472896 SLC39A2Q9NP94 309 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 SLC12A6Q9UHW9 1150 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 RABGAP1Q9Y3P9 1069 aa11.01□□□□□ -0.65
APTX-216ENST00000472896 GOLGA6L10A0A0M3HER8 536 aa11□□□□□ -0.65
APTX-216ENST00000472896 SLC15A5A6NIM6 579 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms