RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 IRF7Q92985 503 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 HEXIM2Q96MH2 286 aaKnown RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 ZNF277Q9NRM2 450 aaPredicted RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 FRRS1LQ9P0K9 344 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 ANAPC4Q9UJX5 808 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 RNF112Q9ULX5 631 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 SPEF1Q9Y4P9 236 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 ST14Q9Y5Y6 855 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 POLA1P09884 1462 aaPredicted RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 J3KRW8 73 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 SIGLEC6O43699 453 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 GSTM1P09488 218 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 BCRP11274 1271 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 COL6A1P12109 1028 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 HOXB4P17483 251 aaPredicted RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 ENPP1P22413 925 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 STT3AP46977 705 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 MAP2K6P52564 334 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 LGALS4P56470 323 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 RAB1AP62820 205 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 MPP1Q00013 466 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 LBRQ14739 615 aaKnown RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 SMAD1Q15797 465 aaKnown RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 GRIK4Q16099 956 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 SGO2Q562F6 1265 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 RRAGBQ5VZM2 374 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 NUTM2GQ5VZR2 741 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 OTOP1Q7RTM1 612 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 SP8Q8IXZ3 490 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 KIAA0319LQ8IZA0 1049 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 CCDC33Q8N5R6 958 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 NUP88Q99567 741 aaPredicted RBP3.21□□□□□ -1.9
XRN1-210ENST00000472697 ALG1Q9BT22 464 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 MAGEL2Q9UJ55 1249 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 GPR45Q9Y5Y3 372 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 WIZO95785 1651 aa3.21□□□□□ -1.9
XRN1-210ENST00000472697 AQRO60306 1485 aaKnown RBP eCLIP3.21□□□□□ -1.97e-7■■■□□ 17.9
XRN1-210ENST00000472697 FAM177BA6PVY3 158 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 RHPN2P1A8MT19 583 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 B4E1Z4 1266 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ACKR2O00590 384 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ULK1O75385 1050 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TIPRLO75663 272 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TIAF1O95411 115 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 EPXP11678 715 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ITIH2P19823 946 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TACR1P25103 407 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SMARCA1P28370 1054 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 RXRGP48443 463 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 GALK1P51570 392 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 PHC1P78364 1004 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ALDH1L2Q3SY69 923 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 FAM47EQ6ZV65 393 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 CHSY3Q70JA7 882 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 CEP68Q76N32 757 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TMTC1Q8IUR5 882 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ESX1Q8N693 406 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TMEM52Q8NDY8 209 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 DEPTORQ8TB45 409 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 FBXW5Q969U6 566 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TCTN2Q96GX1 697 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 BOCQ9BWV1 1114 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 CLDND1Q9NY35 253 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 MARCH2Q9P0N8 246 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 RWDD3Q9Y3V2 267 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SNX13Q9Y5W8 968 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 ADAMTS12P58397 1594 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 NPHP3-ACAD11A0A0J9YXS1 232 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TMEM82A0PJX8 343 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 WTIPA6NIX2 430 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 FAM227AF5H4B4 570 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 NDST3O95803 873 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SEC24CP53992 1094 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 DDX10Q13206 875 aaKnown RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 FSCN1Q16658 493 aaKnown RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 C3orf38Q5JPI3 329 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 PHF19Q5T6S3 580 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 DUSP27Q5VZP5 1158 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SCARA3Q6AZY7 606 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TTLL7Q6ZT98 887 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SESTD1Q86VW0 696 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 CXorf67Q86X51 503 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 ANKLE2Q86XL3 938 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 THEMISQ8N1K5 641 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 CCDC89Q8N998 374 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 FAM181AQ8N9Y4 354 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 DDX54Q8TDD1 881 aaKnown RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 NANOS1Q8WY41 292 aaKnown RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 SMARCC1Q92922 1105 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 PGBD4Q96DM1 585 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 RRP36Q96EU6 259 aaKnown RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 VRK1Q99986 396 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 MYL10Q9BUA6 226 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 MAGEH1Q9H213 219 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 TMEM60Q9H2L4 133 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 KCTD10Q9H3F6 313 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 PIDD1Q9HB75 910 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 SMYD2Q9NRG4 433 aa3.2□□□□□ -1.9
XRN1-210ENST00000472697 GDF2Q9UK05 429 aaPredicted RBP3.2□□□□□ -1.9
XRN1-210ENST00000472697 PLA2G2DQ9UNK4 145 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms