RNA–Protein interactions for RNA: ENST00000472308.1

SHH-205, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-205ENST00000472308 DDAH1O94760 285 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 ATG7O95352 703 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 CLCN5P51795 746 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 PTH1RQ03431 593 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 KIZQ2M2Z5 673 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 MCTP2Q6DN12 878 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 CES5AQ6NT32 575 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 TMC7Q7Z402 723 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 MRPL43Q8N983 215 aaKnown RBP21.02■□□□□ 0.96
SHH-205ENST00000472308 CTCFLQ8NI51 663 aaPredicted RBP21.02■□□□□ 0.96
SHH-205ENST00000472308 PPP1R16BQ96T49 567 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 OSMRQ99650 979 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 MXRA8Q9BRK3 442 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 LY9Q9HBG7 655 aa21.02■□□□□ 0.96
SHH-205ENST00000472308 hCG_1642624A0A1W2PR95 340 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 CLASP2O75122 1294 aaKnown RBP21.01■□□□□ 0.95
SHH-205ENST00000472308 CCNE2O96020 404 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 KIF5BP33176 963 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 PPM1AP35813 382 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 SLC26A2P50443 739 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 MB21D2Q8IYB1 491 aaPredicted RBP21.01■□□□□ 0.95
SHH-205ENST00000472308 ZDHHC14Q8IZN3 488 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 NCOA7Q8NI08 942 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 FEZF2Q8TBJ5 459 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 ZNF558Q96NG5 402 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 SDF4Q9BRK5 362 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 LIMD1Q9UGP4 676 aa21.01■□□□□ 0.95
SHH-205ENST00000472308 MTHFRP42898 656 aa21■□□□□ 0.95
SHH-205ENST00000472308 SMC1AQ14683 1233 aaKnown RBP21■□□□□ 0.95
SHH-205ENST00000472308 ODR4Q5SWX8 454 aa21■□□□□ 0.95
SHH-205ENST00000472308 KANK3Q6NY19 840 aa21■□□□□ 0.95
SHH-205ENST00000472308 LRRC43Q8N309 656 aa21■□□□□ 0.95
SHH-205ENST00000472308 C12orf76Q8N812 135 aaPredicted RBP21■□□□□ 0.95
SHH-205ENST00000472308 TDRD5Q8NAT2 981 aaKnown RBP21■□□□□ 0.95
SHH-205ENST00000472308 LZTS2Q9BRK4 669 aa21■□□□□ 0.95
SHH-205ENST00000472308 MFSD1Q9H3U5 465 aa21■□□□□ 0.95
SHH-205ENST00000472308 AGO4Q9HCK5 861 aaKnown RBP21■□□□□ 0.95
SHH-205ENST00000472308 SPG21Q9NZD8 308 aa21■□□□□ 0.95
SHH-205ENST00000472308 EP300Q09472 2414 aaPredicted RBP21■□□□□ 0.95
SHH-205ENST00000472308 COL1A2P08123 1366 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 PI15O43692 258 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 HBP1O60381 514 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 GPR32O75388 356 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 NPR3P17342 541 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 CRYBB1P53674 252 aaPredicted RBP20.99■□□□□ 0.95
SHH-205ENST00000472308 KRT17Q04695 432 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
SHH-205ENST00000472308 KIAA1841Q6NSI8 718 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 CCDC60Q8IWA6 550 aaPredicted RBP20.99■□□□□ 0.95
SHH-205ENST00000472308 SLC39A11Q8N1S5 342 aa20.99■□□□□ 0.95
SHH-205ENST00000472308 C22orf31O95567 290 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 ATP4AP20648 1035 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 CLLU1OSQ5K130 101 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 ABHD15Q6UXT9 468 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 FLCNQ8NFG4 579 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 USTQ9Y2C2 406 aa20.98■□□□□ 0.95
SHH-205ENST00000472308 DENND4AQ7Z401 1863 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 HOXA2O43364 376 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 IGHDP01880 384 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 VTNP04004 478 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 RXRAP19793 462 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 AOC1P19801 751 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 COL9A3Q14050 684 aaPredicted RBP20.97■□□□□ 0.95
SHH-205ENST00000472308 CEP55Q53EZ4 464 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 CCDC105Q8IYK2 499 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 PGBD1Q96JS3 809 aa20.97■□□□□ 0.95
SHH-205ENST00000472308 NCOR2Q9Y618 2525 aa20.96■□□□□ 0.95
SHH-205ENST00000472308 EOMESO95936 686 aa20.96■□□□□ 0.95
SHH-205ENST00000472308 ANGPT1Q15389 498 aa20.96■□□□□ 0.95
SHH-205ENST00000472308 ZNF484Q5JVG2 852 aa20.96■□□□□ 0.95
SHH-205ENST00000472308 ECHDC2Q86YB7 292 aa20.96■□□□□ 0.95
SHH-205ENST00000472308 EVPLQ92817 2033 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 MED19A0JLT2 244 aaPredicted RBP20.95■□□□□ 0.94
SHH-205ENST00000472308 DDX39AO00148 427 aaKnown RBP20.95■□□□□ 0.94
SHH-205ENST00000472308 BACH1O14867 736 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 GSPT1P15170 499 aaKnown RBP20.95■□□□□ 0.94
SHH-205ENST00000472308 EPCAMP16422 314 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 GNAQP50148 359 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 TYW1BQ6NUM6 668 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 HEATR3Q7Z4Q2 680 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 ABI1Q8IZP0 508 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 PLCD3Q8N3E9 789 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 DZANK1Q9NVP4 752 aa20.95■□□□□ 0.94
SHH-205ENST00000472308 DBR1Q9UK59 544 aaKnown RBP20.95■□□□□ 0.94
SHH-205ENST00000472308 MEIS1O00470 390 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 ATAT1Q5SQI0 421 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 FAM160B1Q5W0V3 765 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 PDXDC2PQ6P474 469 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 TMEM173Q86WV6 379 aaPredicted RBP20.94■□□□□ 0.94
SHH-205ENST00000472308 RAB11FIP4Q86YS3 637 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 AUTS2Q8WXX7 1259 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 RMDN1Q96DB5 314 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 ZBP1Q9H171 429 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
SHH-205ENST00000472308 ZNF302Q9NR11 478 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 CYP26B1Q9NR63 512 aa20.94■□□□□ 0.94
SHH-205ENST00000472308 NT5C1B-RDH14C9J2C7 533 aa20.93■□□□□ 0.94
SHH-205ENST00000472308 SH2B2O14492 632 aaPredicted RBP20.93■□□□□ 0.94
SHH-205ENST00000472308 DHX15O43143 795 aaKnown RBP20.93■□□□□ 0.94
SHH-205ENST00000472308 CXCL14O95715 111 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms