RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.38□□□□□ -0.75
SMC4-213ENST00000472282 EVPLQ92817 2033 aa10.38□□□□□ -0.75
SMC4-213ENST00000472282 J3QL48 77 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 M0R2N6 131 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 TREHO43280 583 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 STAM2O75886 525 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 MMP1P03956 469 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 KCNA2P16389 499 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 IGFBP4P22692 258 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 KRT2P35908 639 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 SREBF1P36956 1147 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 TAP1Q03518 808 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 NEDD9Q14511 834 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 RALGAPA2Q2PPJ7 1873 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
SMC4-213ENST00000472282 GALNT17Q6IS24 598 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 ATP13A2Q9NQ11 1180 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 SETD4Q9NVD3 440 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 KIF3AQ9Y496 699 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 UBIAD1Q9Y5Z9 338 aa10.37□□□□□ -0.75
SMC4-213ENST00000472282 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
SMC4-213ENST00000472282 UNC80Q8N2C7 3258 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 GSTTP1A0A1W2PQM5 241 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 C17orf102A2RUQ5 167 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 NOP56O00567 594 aaKnown RBP10.36□□□□□ -0.75
SMC4-213ENST00000472282 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 THPOP40225 353 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 ADAM17P78536 824 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 NR5A1Q13285 461 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 CNKSR3Q6P9H4 555 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.754e-23■■■■■ 72.8
SMC4-213ENST00000472282 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
SMC4-213ENST00000472282 PHOSPHO2Q8TCD6 241 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 ATP6V0A1Q93050 837 aa10.36□□□□□ -0.75
SMC4-213ENST00000472282 TCHHQ07283 1943 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 CHD9Q3L8U1 2897 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 WIPF1O43516 503 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 CTSHP09668 335 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
SMC4-213ENST00000472282 GUCA2AQ02747 115 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
SMC4-213ENST00000472282 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC4-213ENST00000472282 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 KRT25Q7Z3Z0 450 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 NLRX1Q86UT6 975 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 DBF4BQ8NFT6 615 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 FBXO18Q8NFZ0 1043 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 CRYGNQ8WXF5 182 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 GPRASP2Q96D09 838 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 ZBTB10Q96DT7 871 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 INTS4Q96HW7 963 aaKnown RBP10.35□□□□□ -0.75
SMC4-213ENST00000472282 SENP7Q9BQF6 1050 aa10.35□□□□□ -0.75
SMC4-213ENST00000472282 RSPH10B2B2RC85 870 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 BTBD18B2RXH4 712 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 LPXNO60711 386 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 LGR5O75473 907 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 HSP90AA1P07900 732 aaKnown RBP10.34□□□□□ -0.75
SMC4-213ENST00000472282 RSPH10BP0C881 870 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 ARP10275 920 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 ZNF76P36508 570 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 KCNJ6P48051 423 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 NONOQ15233 471 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■■■ 98.1
SMC4-213ENST00000472282 INF2Q27J81 1249 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 EARS2Q5JPH6 523 aaKnown RBP10.34□□□□□ -0.75
SMC4-213ENST00000472282 FAM117BQ6P1L5 589 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 RUFY4Q6ZNE9 571 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 ARNTL2Q8WYA1 636 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 TNFRSF25Q93038 417 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 PCYT2Q99447 389 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 MXRA8Q9BRK3 442 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 JADE2Q9NQC1 790 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 MTCH2Q9Y6C9 303 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 PRUNE2Q8WUY3 3088 aa10.34□□□□□ -0.75
SMC4-213ENST00000472282 CHD7Q9P2D1 2997 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 ABHD14A-ACY1A0A1B0GW23 586 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 KIF28PB7ZC32 967 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 EDIL3O43854 480 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 GJB5O95377 273 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 PARNO95453 639 aaKnown RBP10.33□□□□□ -0.76
SMC4-213ENST00000472282 CYP3A4P08684 503 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 MARK3P27448 753 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 SKOR1P84550 965 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 GRB10Q13322 594 aa10.33□□□□□ -0.76
SMC4-213ENST00000472282 MTMR1Q13613 665 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms