RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 ADAM15Q13444 863 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 SMAD2Q15796 467 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 UGCGQ16739 394 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 NAALADL2Q58DX5 795 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 SPOUT1Q5T280 376 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 RBM23Q86U06 439 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 ADHFE1Q8IWW8 467 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 FBXL16Q8N461 479 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 LRRC71Q8N4P6 559 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 BICD2Q8TD16 824 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 ZNF668Q96K58 619 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 RGS18Q9NS28 235 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 SAMM50Q9Y512 469 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
NUDCD3-205ENST00000472246 WDR64B1ANS9 1081 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 GPR182O15218 404 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 MSH4O15457 936 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 DCXO43602 365 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 GLP2RO95838 553 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 NRIP1P48552 1158 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 CRYBB1P53674 252 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 NLRP11P59045 1033 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 PRKCEQ02156 737 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 TOB2Q14106 344 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 DSC3Q14574 896 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 SLC24A5Q71RS6 500 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 LINC01465Q8N7H1 131 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 MSLNLQ96KJ4 702 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 CLEC1BQ9P126 229 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 CD207Q9UJ71 328 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 AKT3Q9Y243 479 aa11.12□□□□□ -0.63
NUDCD3-205ENST00000472246 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 OATP04181 439 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 ALADP13716 330 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 PSMA5P28066 241 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 NLRP5P59047 1200 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 RBM10P98175 930 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 ODR4Q5SWX8 454 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 EFHBQ8N7U6 833 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 COLGALT1Q8NBJ5 622 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 TBCKQ8TEA7 893 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 FAM167AQ96KS9 214 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 MAP7D2Q96T17 732 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 RNF19AQ9NV58 838 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 TYW1Q9NV66 732 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 TMEM161AQ9NX61 479 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 PCDHB12Q9Y5F1 795 aa11.11□□□□□ -0.63
NUDCD3-205ENST00000472246 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 PER2O15055 1255 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 MAGEB2O15479 319 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 GAS7O60861 476 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 FGF18O76093 207 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 REC8O95072 547 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 TDP2O95551 362 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 FGFR4P22455 802 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 EVCP57679 992 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 ERVFC1P60507 584 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 DRP2Q13474 957 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 LRCH2Q5VUJ6 765 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 SMRP1Q8NCR6 262 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 SH2D3AQ9BRG2 576 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 TEKT3Q9BXF9 490 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 ADAMTS10Q9H324 1103 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 CWH43Q9H720 699 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 ELAC1Q9H777 363 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
NUDCD3-205ENST00000472246 CSDE1O75534 798 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 PSMD10O75832 226 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 EYA4O95677 639 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 EIF4BP23588 611 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 TMOD1P28289 359 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 PBX3P40426 434 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 GPC3P51654 580 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 USP11P51784 963 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 JAK3P52333 1124 aa11.09□□□□□ -0.63
NUDCD3-205ENST00000472246 FAM189BP81408 668 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms